| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1820 |
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| Symbol | |
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| ID | 5052018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1900059 |
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| End bp | 1901090 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640471993 |
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| Product | lipopolysaccharide heptosyltransferase II |
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| Protein accession | YP_001156597 |
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| Protein GI | 145590000 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGGTA TTCTGATCAT CGCCCCAAAC TGGATTGGGG ACGCCGTCAT GACTCAGCCT
TTATTGGCTC ACCTCAAAAC CCAATTTCCA AACTCCAAAA TTGATGTTCT AGCCAGTGTT
TGGGTTGCTC CTATTTATCG GGCTTGCACA GAGGTAAACG AAGTAATAGA TGCACATTTT
GAACATAAAA AATTGCAATG GGATTTGCGT AAACAATTAG CAAAAAAAAT AGCGGGGAAA
AAATATCAAG CCTGCTTTGT CTTGCCCAAT AGCTTTAAAT CTGCACTCAT TCCATGGCTT
GCTAATATTC CTTTTCGTAT TGGCTATCGA GGTGAATTAC GTTTTGGCCT GATTAACTTA
GCACTAGAAA ATCCTAGCAA GGTAAATCGG CCGCCGATGG TAGAGCACTA TCTTGCACTA
AGTAGTTTGT TGCAAGAAGA TCAACAGGCA ATACCACGCA AGCTCACCCC CACACTCAAT
GTTTCATCAG CTGCGCAAGA GTCTGTTGAA AAGAAATTAA GCAATCTTAA GATTCCATCT
CAAACACTTT ATATTTTTTG CCCAGGCGCA GAGTATGGTC CAAGCAAACG CTGGCCTACA
GATCACTTTG CCAAATTGGC TCAAGAATTG ATACAGGAAA ACTCTACTAA TCAAATCATT
CTTCTTGGGG GCAAAGGAGA TCAAGCTATC TCCCAAGAAA TTGCATCGCA AGCAAATCAA
GCATCTCGTA TTCACAACTG GTCAGGAACA ACCACTTTAG ATGAGGCTAT TGCGTTAATT
GGTATGGCTA AAGCAGTCAT TAGTAACGAT TCTGGCTTAA TGCACATTGC TGCCGCACTC
AGAACCCCGC AAGTTGCGAT CTTCGGTTCT AGTGACCCCG CTCATACCCC GCCTTTATCA
GACAAGGCTA AAGTCATTTG GTTAAATCTA CCCTGTAGCC CCTGCCACAA AAAAGAGTGC
CCCCTTGGTC ATTTGCAGTG CTTAAAAGAC ATCTCTCCTG AACAAGTATT GGCTACACTA
AACACCTTGT AA
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| Protein sequence | MHGILIIAPN WIGDAVMTQP LLAHLKTQFP NSKIDVLASV WVAPIYRACT EVNEVIDAHF
EHKKLQWDLR KQLAKKIAGK KYQACFVLPN SFKSALIPWL ANIPFRIGYR GELRFGLINL
ALENPSKVNR PPMVEHYLAL SSLLQEDQQA IPRKLTPTLN VSSAAQESVE KKLSNLKIPS
QTLYIFCPGA EYGPSKRWPT DHFAKLAQEL IQENSTNQII LLGGKGDQAI SQEIASQANQ
ASRIHNWSGT TTLDEAIALI GMAKAVISND SGLMHIAAAL RTPQVAIFGS SDPAHTPPLS
DKAKVIWLNL PCSPCHKKEC PLGHLQCLKD ISPEQVLATL NTL
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