| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1812 |
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| Symbol | |
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| ID | 5052956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1892299 |
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| End bp | 1893483 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640471985 |
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| Product | phosphoribosylaminoimidazole carboxylase, ATPase subunit |
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| Protein accession | YP_001156589 |
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| Protein GI | 145589992 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
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| TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00306257 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGATC GTATGGAACC CATTTTGCCG GGTTCGTATT TAGGAATATT GGGTGGTGGT
CAATTGGGAA GAATGTTCAC CCAGGCTGCC CAAGCAATGG GGTACAAGGT TTGCGTTCTA
GATCCTGGTC CCGATAGTCC TGCGGGCTCA ATCGCAGAAA AATTTATTCA AGCGGACTAT
ACAGATTCTG CAGCGCTTAA AGAGATGGCT GCCCTATGCG CCTCGGTGAG TACTGAGTTT
GAGAATGTTC CCGCCCAAGC TTTAGATGAA TTAGAGTCTT TGGGGGTATT TGTTGCTCCT
AGAAGTAGCT GTGTATCTTT GGCGCAAAAT CGTATTGCCG AGAAGAAATT TTTAGCTACT
TGGAAGTCTG AAACCAATAT TGGCCCAGCA CCAAACTTTG TCATTGAGCA TGACGCTGAT
ATTACGCATG TTCCAGCCAA TCTATTCCCT GGCATCTTAA AAACTGCTCG CATGGGATAT
GACGGCAAAG GTCAAATCAC TGTTCACAGC GAAGATGAGT TGACTGTGGC ATGGAATAAT
TTTGGGCGCG TCCCTTGTGT GCTTGAAAAG CGTATGGAAT TGGATTTTGA AGTATCTGCA
CTAGTGGTCC GCGGCTATGA TGATGCGGTT GTCGCTTATC CAGTGTCGCA AAATATTCAC
CGCAATGGGA TTTTGCATAC TTCAACAGTG CCAGCACCAT CACTGAAGCC TGCACAAGAG
AAAAAAATTA TTGATGCTGC AAAAGCATTG ATTCGTAAAA TTGATTACGT TGGCGTCCTT
TGCGTAGAGT TCTTTGTCTT GAAGAGTGGC GATATCGTTG CTAATGAGAT TGCACCAAGA
CCCCATAACT CTGGGCACTA CACCATGGAT GCTTGTGTGA GTAGTCAGTT TGAACAGCAA
GTGAGGGCCA TGGCCCGCCT CCCATTGGGT GATACCCGGC AATTAGCCCC GGTATCCATG
CTCAATTTGT TGGGTGATCT TTGGTTTGAA GGCAGTGAGG ATTTACCGAA GGAGCCTGCA
TGGAATAAGG TTCTTGCTCA TCCTGATGCA AAACTGCATT TGTACGGAAA GTCTGCCCCT
CGCATTGGTA GAAAAATGGG TCATATTAAT TGTTTGGGTG AAGCTGTAAA TGAGGCTCGC
AAGAACTGCG CTGCAGTCGC CGTTGAATTA GGGATCGAGC CCTAG
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| Protein sequence | MADRMEPILP GSYLGILGGG QLGRMFTQAA QAMGYKVCVL DPGPDSPAGS IAEKFIQADY
TDSAALKEMA ALCASVSTEF ENVPAQALDE LESLGVFVAP RSSCVSLAQN RIAEKKFLAT
WKSETNIGPA PNFVIEHDAD ITHVPANLFP GILKTARMGY DGKGQITVHS EDELTVAWNN
FGRVPCVLEK RMELDFEVSA LVVRGYDDAV VAYPVSQNIH RNGILHTSTV PAPSLKPAQE
KKIIDAAKAL IRKIDYVGVL CVEFFVLKSG DIVANEIAPR PHNSGHYTMD ACVSSQFEQQ
VRAMARLPLG DTRQLAPVSM LNLLGDLWFE GSEDLPKEPA WNKVLAHPDA KLHLYGKSAP
RIGRKMGHIN CLGEAVNEAR KNCAAVAVEL GIEP
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