Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1785 |
Symbol | |
ID | 5051965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 1861967 |
End bp | 1862836 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640471958 |
Product | pyrroline-5-carboxylate reductase |
Protein accession | YP_001156562 |
Protein GI | 145589965 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACAT CAGAACATAT TCAAAACAAT AGTAATGCCC ATATCACCTT TATTGGTGGT GGCAACATGG GTCGCGCCCT TATCAGTGGT TTGATTGCTA ACGGGTTTGA ACCAAATCAA ATTTCTGTCG TTGAGTCTAA TGCCAGTACA GCCTTAAAGC TTCATGAAGA TTATGGAGTG CAAGGAATTG GGGCCTTAGA TCACATTGCC TTTGATTTCA GCAAAAACAA TGTTGTTGTG ATGGCAATTA AACCGCAAGA CTTTAATGTC GTTGCCAAAG GGCTTGCATC CAAACTCAAA CATGCTTCAG CTCCCGGCCC GCTGATCCTC AGTATTGCCG CCGGTATTCG CTTAAAGGAT ATGAGTCGCT GGCTAGATCA CACTCGTTGT GTACGAGCCA TGCCAAATAC CCCAGCCCTC ATCGGCAAAG GAATCACTGG ATTATTTGCT GATGCAGCCG TAGGTCAATC AGATCGTACT TTGGCTGAAA CTATTTGTAA TGCTGTAGGG CAATCCGTAT GGGTTTCAGA AGAAAACCTG ATGGATGCGG TTACTGCTGT TTCAGGTAGT GGTCCAGCTT ATGTATTTGC TTTTATCGAG GCAATGCAAT CCGCCGGGGA AAAACTGGGG CTTGATGAGA AGACCGCTCG TAAATTAGCT TACGCAACCT TAGAAGGCGC TACCCAATTA GCCCATAACT CCGATGAACA TGCAGGGGTG CTACGCGAAC GGGTTACTTC CAAAGGCGGC ACAACTGCTG CTGCGCTCGA TGTCATGAAG CAGCATGGAT GGAACGAGAT TTTAGAAAAG GCGATTGATG CCGCAAGTCA ACGCGGTAAA ACAATGGGTG ACGAGCTAGG CCAGAGCTAA
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Protein sequence | MSTSEHIQNN SNAHITFIGG GNMGRALISG LIANGFEPNQ ISVVESNAST ALKLHEDYGV QGIGALDHIA FDFSKNNVVV MAIKPQDFNV VAKGLASKLK HASAPGPLIL SIAAGIRLKD MSRWLDHTRC VRAMPNTPAL IGKGITGLFA DAAVGQSDRT LAETICNAVG QSVWVSEENL MDAVTAVSGS GPAYVFAFIE AMQSAGEKLG LDEKTARKLA YATLEGATQL AHNSDEHAGV LRERVTSKGG TTAAALDVMK QHGWNEILEK AIDAASQRGK TMGDELGQS
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