| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1779 |
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| Symbol | |
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| ID | 5053488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1855553 |
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| End bp | 1856677 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640471952 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_001156556 |
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| Protein GI | 145589959 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAC AAAATACGAA TCCCGCCAAT TGGTACTCCG CTGTAGACAA AACATCGGAT
ACCGACGATC AACGCATTGA CAATATCTCC GTTCTGCCTC CGCCAGAACA TTTGATTCGT
TTCTTTCCTA TTTCAGGAAC TCCAACCGAA TCGTTAATTA GCAATACTCG CAAAAAGATT
CGGGACATTA TTCATGGAAA AGATGATCGC CTATTAGTGA TCATTGGACC TTGCTCAATT
CATGATCCAA AAGCAGCGCT CGAATATTGC CAGCGTCTTT TGAGAGAGCG CGATCGCTTT
GCAGGCGAAT TAGAAATTGT GATGCGCGTG TACTTTGAAA AGCCACGTAC TACTGTTGGC
TGGAAGGGTT TGATTAATGA CCCTTACTTG GATGAAAGCT ATCGTATTGA AGAAGGTTTA
CGTTTAGCTC GCCAAGTGTT GATGGAAATT AATCGCCTTG GTATGCCAGC AGGCAGCGAA
TTTCTTGATG TGATTTCTCC GCAATATATT GCTGATCTGA TTTCTTGGGG AGCGATTGGT
GCTCGCACTA CCGAGAGTCA GGTTCACCGT GAGCTTGCAT CTGGATTGTC CGCTCCAATT
GGCTTTAAAA ATGGCACCGA TGGCAATATC AAAATTGCTA CCGACGCTAT CCAAGCAGCA
GGACGTCCAC ACCATTTCTT GTCAGTGCAT AAAAACGGTC AAGTATCTGT GGTTGAAACA
AAAGGGAATA AAGACTGCCA CGTTATTTTG CGTGGTGGTA AAGAGCCTAA TTATGAAGCG
AAATTTGTAC AGGAAGCCTG CTCTGAGCTC GAAACTGCAA AGCTTCCAGC CAGCTTGATG
GTGGATTTAT CTCATGCGAA TTCAAGTAAA AAACATGAGC GTCAAATTAT TGTGGCCGAC
GACGTTGCAC AGCAAATTGA ATCTGGATCA CATCAGATCT TTGGTGTGAT GGTGGAAAGT
CATTTGAATG ACGGCGCACA AAAATTCACG CCCGGAAAAG ATGACCCTAG CAATTTGGAG
TATGGCAAAA GTATTACTGA TGCCTGCATC AATTGGGATG ACTCTGTAAA AGTATTGGAG
CGTCTTGCTG GAGCAGTAAA AAAACGTAGA AGCAATAAGA AGTAA
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| Protein sequence | MSQQNTNPAN WYSAVDKTSD TDDQRIDNIS VLPPPEHLIR FFPISGTPTE SLISNTRKKI
RDIIHGKDDR LLVIIGPCSI HDPKAALEYC QRLLRERDRF AGELEIVMRV YFEKPRTTVG
WKGLINDPYL DESYRIEEGL RLARQVLMEI NRLGMPAGSE FLDVISPQYI ADLISWGAIG
ARTTESQVHR ELASGLSAPI GFKNGTDGNI KIATDAIQAA GRPHHFLSVH KNGQVSVVET
KGNKDCHVIL RGGKEPNYEA KFVQEACSEL ETAKLPASLM VDLSHANSSK KHERQIIVAD
DVAQQIESGS HQIFGVMVES HLNDGAQKFT PGKDDPSNLE YGKSITDACI NWDDSVKVLE
RLAGAVKKRR SNKK
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