Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1772 |
Symbol | hrcA |
ID | 5052243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1842493 |
End bp | 1843503 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640471945 |
Product | heat-inducible transcription repressor |
Protein accession | YP_001156549 |
Protein GI | 145589952 |
COG category | [K] Transcription |
COG ID | [COG1420] Transcriptional regulator of heat shock gene |
TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGAAC GTTCCCGCGC CCTACTAAAA ACCCTCATCG AGCGCTATAT CGAAGAGGGA CAGCCTATTG GCTCGCGCAC ATTGTCCAGA TTTTCAGGTT TAGACCTCTC AGCGGCCACC ATTCGCAATG TCATGGCTGA TCTAGAGGAT ATGGGTCTAG TAACAAGTCC ACACACCTCA GCAGGCCGTA TTCCCACTCC TCGGGGCTAT CGTTTGTTTG TCGACACCAT GGTGACGGTT CGCCCTTTGG AAGAAATGGC AGCTCGCGAG GTTGAAAAAG GTCTTTTGCC GGACTCTCCG CAGCGTGTTT TGAATTCAGC CGCCCAGATT TTGTCGAACC TCACTCATTT TGCTGGTGTT GTGATGACCC CCAAGCGTGC GCAAGTGTTT AAACATATTG AATTTTTGCG TCTAGGCGAA GGCAAGATTT TGCTCATTAT GGTTACCCCA GAGGGTGATG TTCAAAATCG CATCCTTCCT ACTACTCAGG ATTACACGCC TAGTCAGCTG ATAGAGGCCG GCAATTTTAT TAATACTCAG TTTGCTGGTA AAAGTTTTGA GCAAGTACGT TTACACCTCA AATCCGATTT AGATAATTTA CGTGCAGATA TTTCTGGCCT CATGGCATTA GCCCTGCAGA GCGGTGTAGC GGATTACGAC ATGGGGCGTG GTGATATGGT GCTCTCTGGA GAACGTCGCT TATTAAACGT AGGTGATTTA AGTTCTAATT TAGATAAGCT GCGCAAAATG TTTGACATGT TGGAGCAAAA GTCAGTCCTG ATGCAATTGC TAGACGTATC AAGTCATGCG GATGGAATTC AGATTTTTAT TGGCGGCGAG AGTGACTTAT TGCCTTATGA GGATTTGGCT GTCATCAGCG CCCCATATAG CGTCGATGGC CAGATAGTCG GAACGCTGGG AGTGATTGGT CCTACTAGGA TGGCCTACGA TCGCGTTATT CCGATTGTTG ATATCACTTC CAAATTGTTG TCTGGCGTTT TGAGTTCTTA A
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Protein sequence | MDERSRALLK TLIERYIEEG QPIGSRTLSR FSGLDLSAAT IRNVMADLED MGLVTSPHTS AGRIPTPRGY RLFVDTMVTV RPLEEMAARE VEKGLLPDSP QRVLNSAAQI LSNLTHFAGV VMTPKRAQVF KHIEFLRLGE GKILLIMVTP EGDVQNRILP TTQDYTPSQL IEAGNFINTQ FAGKSFEQVR LHLKSDLDNL RADISGLMAL ALQSGVADYD MGRGDMVLSG ERRLLNVGDL SSNLDKLRKM FDMLEQKSVL MQLLDVSSHA DGIQIFIGGE SDLLPYEDLA VISAPYSVDG QIVGTLGVIG PTRMAYDRVI PIVDITSKLL SGVLSS
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