| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1760 |
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| Symbol | |
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| ID | 5052123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1829989 |
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| End bp | 1830990 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640471933 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_001156537 |
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| Protein GI | 145589940 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.601596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACTG AACCCTACAT TCAGCCTATG CAGTCACCAG ACTTCAAGCC CATTCTTTGT
ATTGTTGGCC CTACTGGTGC AGGCAAAACC CATCTCGCCA TGTCTCTTGC CGAGCATGCT
CAATCTATTG GTTTAACTGT AGAGCTGATT AGTATGGATT CAGCGCTGGT TTATCGAGGC
CTAAATATTG GAAGTGCTAA ACCAAGCAAA GAAGAGCAAG CCACAGTAAT CCACCATCTG
ATTGATATCT TGGAGCCCAC TGAAGTCTAT TCAGCTGCGC GATTTGCCAA AGATGCGAAA
CAACTCTGTG AAGACATTCG GAGCCGCGGA AATATTCCGG TGGTCGTGGG TGGAACAATG
TTGTATTGGC GGGCATGGGC TCACGGACTC TCTTCTCTGC CACCAGCCAA TACAGACATT
CGGGCTCGCT TAGATGAAGA AGGGAAATCG CTTGGTTGGC CAGCGATGCA TACCAAGCTC
GCCCAGATTG ACCCTGAAAC AGCCGCACGT TTAAAGCCAA ATGATTCCCA ACGGGTACAG
CGCGCCCTAG AGGTCTTTGA AATTACGGGC AAGCCAATGT CAGCCTTGTT AGCTGAATCG
CCCAGCGAGG ATGGTAGAGA AGGTTCTGTG ATACCTCCCT GGATCAACCT GGTTTCTCTT
GAACCGAGTG ATCGTAAAAG ACTGCATCTC AATTTAGAAA AACGTTTTGA TGAAATGCTT
GTTGGTGGGC TACTTGAGGA AGTGAAAACT TTAAAGGCAA ATGTAGCTTT GCATGCCGAT
CTACCTGCGA TTCGCTCGGT TGGGTACCGT CAAGTTTGGG AATATCTTGA TGGGCAAACT
GATTGGGAAG AGATGCGCTA CAAGTCGCTA GCCGCTACAA GGCAGCTTGG CAAACGGCAA
CTCACCTGGT TACGTGCGAT GACTGGCAGA AACACCTTTG ACCCCTTCAA CCCAAATGAG
TTAAAGGCGG CCTTAGATTT TTGTAAGCGT AATTTAGTTT AA
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| Protein sequence | MQTEPYIQPM QSPDFKPILC IVGPTGAGKT HLAMSLAEHA QSIGLTVELI SMDSALVYRG
LNIGSAKPSK EEQATVIHHL IDILEPTEVY SAARFAKDAK QLCEDIRSRG NIPVVVGGTM
LYWRAWAHGL SSLPPANTDI RARLDEEGKS LGWPAMHTKL AQIDPETAAR LKPNDSQRVQ
RALEVFEITG KPMSALLAES PSEDGREGSV IPPWINLVSL EPSDRKRLHL NLEKRFDEML
VGGLLEEVKT LKANVALHAD LPAIRSVGYR QVWEYLDGQT DWEEMRYKSL AATRQLGKRQ
LTWLRAMTGR NTFDPFNPNE LKAALDFCKR NLV
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