| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1729 |
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| Symbol | |
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| ID | 5052016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1801290 |
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| End bp | 1802225 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471902 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001156506 |
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| Protein GI | 145589909 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.764248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATAT TTCTTCAGCA AATTATTAAT GGCTTAGTGC TGGGGAGTAT TTACGCCTTA
ATTGCTTTGG GCTACACCAT GGTCTATGGT GTTCTGGGCA TCATTAACTT CGCCCATGGT
GAGGTACTGA TGATCGGCGC AATGGTCTCG CTTTCATTAT TGCGCTTGAT TTTGAGCTGG
ACAAGCGATT TACCTGGATG GCTAACTCTA CTGATTGTTT TGCCTGTAAC AATGGCGGTC
TGTGCCGGCC TGAGCTACTG GATTGAGCGT ATTGCTTATC GACCTTTGCG TAATGCGCCG
CGTTTAGCGC CACTGATATC GGCAATTGGT ATGTCGATTT TGCTGCAAAC GATTGCGATG
ATGATTTGGT CTAGAAACCC AATGACTTAT CCACAGTTAT TACCTTCAGC CCCGATTGAG
CTCGGGAGTA CTGGTGCCAC CATTACCGGC AAAGAAATCA TCATTATTGT TGTGGCATTA
CTCGTGATGT GCGGATTGCT GTTCTTGGTT GAAAAAACCA AACTCGGTAG AGCCATGCGC
GCCACCGCTG AGCAAACGCA AATTGCCGCT TTGATGGGTG TCAATCCTAA TCGCGTAATC
TCAATTACGT TTATGTTGGG TGGTGCCTTA GCGGGGTTAG CCGGCGTTAT GATTGCGAGT
AACTATGGCA ATGTCCATTT TTATATGGGT TTTATTCCAG GGTTAAAAGC ATTTACTGCT
GCCGTCTTAG GAGGCATTGG AAATCTTCAA GGTGCCATGC TGGGTGGATT GCTTTTGGGA
TTAATTGAGG CCTTAGGTGC GGGCTATATC GGCGAACTGA CTGGAGGTGT ATTTGGTTCA
AACTACCAAG ACATCTTTGC TTTCTTGGTA TTAATTTTAG TATTGGTATT ACGCCCAACT
GGTTTGCTGG GTGAGAAGGT ATCTGATCGT GCTTAA
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| Protein sequence | MDIFLQQIIN GLVLGSIYAL IALGYTMVYG VLGIINFAHG EVLMIGAMVS LSLLRLILSW
TSDLPGWLTL LIVLPVTMAV CAGLSYWIER IAYRPLRNAP RLAPLISAIG MSILLQTIAM
MIWSRNPMTY PQLLPSAPIE LGSTGATITG KEIIIIVVAL LVMCGLLFLV EKTKLGRAMR
ATAEQTQIAA LMGVNPNRVI SITFMLGGAL AGLAGVMIAS NYGNVHFYMG FIPGLKAFTA
AVLGGIGNLQ GAMLGGLLLG LIEALGAGYI GELTGGVFGS NYQDIFAFLV LILVLVLRPT
GLLGEKVSDR A
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