Gene Pnuc_1724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1724 
Symbol 
ID5052040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1796399 
End bp1797445 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content48% 
IMG OID640471897 
ProductCDP-6-deoxy-delta-3,4-glucoseen reductase 
Protein accessionYP_001156501 
Protein GI145589904 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
[COG0633] Ferredoxin 
TIGRFAM ID[TIGR02008] ferredoxin [2Fe-2S] 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGTGT CTTATCAGGT CACGCTCAAA AAGAGCGGCA AACAATTTAC CGTTACTCCA 
GATGAAAATG TTCTGGAAGC CGCTTTGCGC CAAGGGATTA AGCTGCCCTA TGGCTGCAAA 
AATGGGGCCT GTGGATCCTG CAAAGGTAAG ATCCTAGAAG GTCAAGTCAA CCATGGCCAG 
CATAGCGAAA ATGCTTTGAG TAAAACCGAA GAGACTGCAG GCGGCATTTT ATTTTGCTGT 
GCCCATCCCC AGTCTGACCT ACTCATTGAA GCCCGTGAAG TAGAAGGATC GGGAGATATC 
GCTATTCGCA AGGTGCCTTG TCGTGTAAAC GAGATCAGCA AGCCTAGCAA TGATGTAGCT 
ATTTTGAAGT TACAGCTTCC TGCAGCTGAA CGCTTTCAGT TCCTGGCTGG CCAGTATTTG 
GAGTTCCTAC TCAAGGATGG CCAACGTCGC GCCTACTCGA TTGCGAATGC CCCCGAACAA 
GAAGGTCCTC TTGAACTTCA TATTCGCCAT ATGCCTGGCG GCCTCTTCAC TGATTTTGTT 
TTTGGGGTCG CAACACCTGC ACTGAAAGAA AAAGATATCT TGCGATTTGA AGGCCCGCTT 
GGTAGTTTTT TCCTCAGAGA AGATTCTAAA AAGCCCATTA TTTTTCTAGC GGCTGGCACC 
GGCTTTGCGC CAATTAAATC CATCATTGAG CAAATGCGGG CTAAAAAGAT TCAGCGGCCT 
ATTTCCCTTT ATTGGGGTGG ACGGCGTCCT GCTGATCTGT ATCTCGATTC TCTTTGCCAA 
TCCTGGGAAA AAGAGATGCC GAACTTTAAA TATGTGCCCG TCATTTCGGA TGGAACGGCA 
GAAGATGCTT GGCAAGGTCG CTCCGGCTTT GTTCATCAAG CCGTCATGGC AGATCACCCC 
GATCTCACAG AGTTTCAGGT CTATGCCTGT GGCGCCCCCG TTATGGTCAA TGCGGCACGA 
AATGACTTTT CATCAAAATG CCATCTTCCT GAGGAAGAAT TCTTTGCCGA CTCCTTTACT 
AGCGCAGCTG ATTTAGCCGC AAACTAA
 
Protein sequence
MRVSYQVTLK KSGKQFTVTP DENVLEAALR QGIKLPYGCK NGACGSCKGK ILEGQVNHGQ 
HSENALSKTE ETAGGILFCC AHPQSDLLIE AREVEGSGDI AIRKVPCRVN EISKPSNDVA 
ILKLQLPAAE RFQFLAGQYL EFLLKDGQRR AYSIANAPEQ EGPLELHIRH MPGGLFTDFV 
FGVATPALKE KDILRFEGPL GSFFLREDSK KPIIFLAAGT GFAPIKSIIE QMRAKKIQRP 
ISLYWGGRRP ADLYLDSLCQ SWEKEMPNFK YVPVISDGTA EDAWQGRSGF VHQAVMADHP 
DLTEFQVYAC GAPVMVNAAR NDFSSKCHLP EEEFFADSFT SAADLAAN