Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1699 |
Symbol | |
ID | 5053237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1765674 |
End bp | 1767611 |
Gene Length | 1938 bp |
Protein Length | 645 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640471872 |
Product | DNA primase |
Protein accession | YP_001156476 |
Protein GI | 145589879 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACTCA TCCCGCAATC CTTCATTGCC GATCTTTTAA ATCGGGTAGA CATCGTTGAT GTGGTTGGGC AGCACGTGAA GTTAAAAAAG GCAGGCGCAA ACTATCAAGG TCTGTGCCCC TTTCATTCAG AAAAATCTCC TTCGTTTTCC GTATCACCAA CAAAACAGTT TTATCACTGC TTTGGTTGTG GTGCGCATGG CTCTGCCATC AGTTTCATGA TGGAGTATTC CGGTCTAGGG TATGTAGATT CGATTGAAGA GTTGGCGCGT TCTGCTGGTT TAGATGTTCC GCGGGAAGAG CGGGCTGCCA ATGACGTAGC CCGCCAACAG CAAGCCATGG CCTTAAGTGA AGTTATGAGT TCTGCCGCAG ATTGGTATCG CCAGCAACTC AAAGGCAATA CTCGCGCAGT GGAGTACTTA AAAGGTCGCG GCCTTACTGG AGAAATTGCT AAGCGCTACT CATTAGGTTA TGCCCCAGAT GGTTGGCAAG GTCTTGAGGC CGTATTTGGT CCCTATAGCA ATGATGAGGT GGCAAAGACC TTGGTGGAAG GTGGCTTAAT CATTCAGGGT GAGCAGGCTG AAGGGGCTCC AGTAAAGCGC TACGATCGTT TTCGCGATCG AGTGATGTTC CCAATTCGTA ATCCCAAGGG TCAAACCATT GGCTTTGGTG GACGCATTTT GGATCAGGGC GAGCCAAAGT ATTTAAATTC TCCAGAGACC CCTTTGTTCT CTAAAGGCAA CACTCTGTAC GGTTTGTTTG AGGCAAGACA AGCGATACGC GCGCAAGAAT ATGTATTGGT GTGTGAAGGC TATATGGATG TGGTTGCTTT GGCCCAATTG GGATTTCCGA ATGCCGTAGC AACCTTGGGT ACAGCATGTA CTGCAAACCA TGTGCGGATG TTGTTACGTC AAACTGATCG CATCGTGTTT TCATTTGATG GCGACTCTGC CGGTCAACGC GCAGCGCAGC GCGCTCTTGA GGCTTGCTTG CCGCTCATGT CCGACGATAA AGAAATTCGT TTCTTATTCC TTCCGACTGA GCATGACCCC GATAGTTATG TGCGGGCGTA CGGCGCACCA GCCTTTGAAA AAGTCATCAA AGAGGCGATG TCAATTTCTA GTTTCTTTTT CAAGATTGCT AGTGAAGGCC ATGAGCTCAC TACCCCAGAG GGTAGAGCCC ATACGCATCA CGCTGCTAAG CCTTTGCTCT TATCGATGCC ACCGATTGCA CTGCGCACAC AAATATTGCG CGAGCTCGCC ATTAGAACGA ATACCACCCC TGCTGAATTA GAAGCATTTT GTGGTTTAAC GGTAGTGCCA GCGCCAGTCC AAAAACAAGC GTATCAACCG ACCCAAGCCC GTTCACAAAA TAATTTTTCC AATACGGGAA ATAGACAGGG TGCACCATGG CAAGCATCTA AAGGTTCAGC AAAACGGGTT GCACAAAATA TTGAGCCTCC TAAAGCGCCG ACTGATTTAG CAGAACAAAT GTTGCGTGTC TTGATACAGT TTCCGCATTT AGGAAAAGCA TTGGATGGCA ATAAACGCAC GCTCGCCTTG AAGGCAGCAG AGCAACGCTC TACTAAAGCG CATGCCCTAA TGCAAGATCT TTTATCGCAA TGTGATTTAG TGGAGTTGGT ACCTGGTGAT GCTGGTAAGC CGGCCAGTGT TGGCGCAGGT TCATTTGCAA TGTTCCAGGA TCAACTGTCT CGTAGCGAGC TCGCACCTTT GTATGAAGTA CTCAGAAAAC GGGTGATGGA CTCAGATTTG GATCTAGATG GAGCGGTGGC GGATCTGGAT GGGGCCTTCA AAAAACTGGA ACTGACTCAT CTCAAGCAGG AAATGACAGA AATCACCCAG CGACTCTCTG GCGGGACTGC AACCGAGCAA GATCGGGCGC GTTACCGTGA ATTAGGCGAA AAGCTGAAAT TCTCTTAA
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Protein sequence | MALIPQSFIA DLLNRVDIVD VVGQHVKLKK AGANYQGLCP FHSEKSPSFS VSPTKQFYHC FGCGAHGSAI SFMMEYSGLG YVDSIEELAR SAGLDVPREE RAANDVARQQ QAMALSEVMS SAADWYRQQL KGNTRAVEYL KGRGLTGEIA KRYSLGYAPD GWQGLEAVFG PYSNDEVAKT LVEGGLIIQG EQAEGAPVKR YDRFRDRVMF PIRNPKGQTI GFGGRILDQG EPKYLNSPET PLFSKGNTLY GLFEARQAIR AQEYVLVCEG YMDVVALAQL GFPNAVATLG TACTANHVRM LLRQTDRIVF SFDGDSAGQR AAQRALEACL PLMSDDKEIR FLFLPTEHDP DSYVRAYGAP AFEKVIKEAM SISSFFFKIA SEGHELTTPE GRAHTHHAAK PLLLSMPPIA LRTQILRELA IRTNTTPAEL EAFCGLTVVP APVQKQAYQP TQARSQNNFS NTGNRQGAPW QASKGSAKRV AQNIEPPKAP TDLAEQMLRV LIQFPHLGKA LDGNKRTLAL KAAEQRSTKA HALMQDLLSQ CDLVELVPGD AGKPASVGAG SFAMFQDQLS RSELAPLYEV LRKRVMDSDL DLDGAVADLD GAFKKLELTH LKQEMTEITQ RLSGGTATEQ DRARYRELGE KLKFS
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