Gene Pnuc_1645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1645 
Symbol 
ID5052536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1710348 
End bp1711166 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content41% 
IMG OID640471817 
Producthypothetical protein 
Protein accessionYP_001156422 
Protein GI145589825 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGAAAA ACCTTACAAA AGATGAGCTT GATAGGGCGT ATAACAATTC ATTGGCTGTT 
GCGAATAGCG CCCAGATAGT TGAGGGTTGG ATGCAAGCTA GCGATCAGGT GCGAGAGAGC 
ACAAAAGGTG AGCTAGACAT TAGGTATGGT CCACATCCAA GGCAGTCATA TGATTACTTT 
TCTGCTGGAG ATCATTCTCC CATCATGGTT TATATACATG GCGGTTTTTG GCAGTTCCGC 
TCTAAAGATG ATTTCACATT CATAGTTCCA CCTTTAATAG ATTTAGGCTT TAGTGTTGCA 
ATGCTAGGTT ATAGATTGGC GCCTGATGCA ACAATGGAGC AAATTATTGC GGATATACGT 
ACCGGGTTAA GTGCAATTGA AGTTAAGGTT CGGGACGAAA GAGGATCGTT TCCAGGTTTT 
TATCTTCTTG GATGGTCTGC AGGGGCTCAC TTGGTTGCTT CAGTTTTAAA TGAGCCCAAT 
GTCAAAGATG GAATTTGTAT CAGCGGAGTC TATGACTTAG AACCAATTCG ACACTGCTAT 
GTAAACGATC AGTTGCATTT GAATCTTGAA GCTTCTCTGG AGAACTCACC AATTCTAAAA 
ACGAATCATT TTGGAAAAGT GATTGACTTA TTTGTCGGTA GTGCTGAGTT GCCGCATATG 
CAAGGACAAA CTACCCAATT TTATGAGTAT CGAAAGCAAC ACTTACAACC AGGTAAATTT 
CAGTTGTTGA ATGGTTTTAA TCACTACACC ATCTTTGATG AGTTAGTGAG AGCTAATGGA 
ACAATCCATA AAACCATCAA AGACAGAGTG TTAGGCTAA
 
Protein sequence
MWKNLTKDEL DRAYNNSLAV ANSAQIVEGW MQASDQVRES TKGELDIRYG PHPRQSYDYF 
SAGDHSPIMV YIHGGFWQFR SKDDFTFIVP PLIDLGFSVA MLGYRLAPDA TMEQIIADIR 
TGLSAIEVKV RDERGSFPGF YLLGWSAGAH LVASVLNEPN VKDGICISGV YDLEPIRHCY 
VNDQLHLNLE ASLENSPILK TNHFGKVIDL FVGSAELPHM QGQTTQFYEY RKQHLQPGKF 
QLLNGFNHYT IFDELVRANG TIHKTIKDRV LG