| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1633 |
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| Symbol | |
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| ID | 5053191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1699552 |
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| End bp | 1700829 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640471806 |
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| Product | type III effector Hrp-dependent outers |
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| Protein accession | YP_001156411 |
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| Protein GI | 145589814 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0471944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGTTT TATTGGGTTG CATTGCAGAT GATTTCACAG GTGGTACAGA CCTAGCTGGC
ATGCTAGTGA AGTCTGGGAT GAAAACCATC CAATTGATTG GGGTACCAAC GGAACCGGCG
CCTCACGATG TTGATGCAGT AGTCATTGCA TTGAAATCTA GAACAAACCC AGCGCCTGAG
GCTATTGAGG AATCACTGCG TGCTTTAGAG TGGCTAAAGA GTCAAGGATG TCAGCAATTC
TTCTTTAAAT ACTGCTCAAC ATTTGATTCC ACCCCAAAAG GAAATATAGG TCCGGTGGCC
GAGGCCTTAA TGAAGGCACT TGATACGAAG TTCACTATTG CATGCCCCGC GTTTCCTGCA
AATAAGCGCA GTATTTACAA AGGACATTTA TTTGTTGGGG ATGATCTGCT TAGTGAATCT
GGCATGCGCA ATCATCCTCT GACACCGATG ACGGATTCAA ATTTAGTTCG TGTGTTGCAA
CAACAGGTTC AATCGAAGGT TGGCTTAACC GACTACTCAG TGGTCAAGGG TGGTGCAGGA
GTAATTCAAA AGCGCTTTGC TGATTTGCGA AAGGACGGCA ATCAGTTCTC TATAGTGGAT
GCCTTATCTG ATATTGATTT ATATAGTATT GGAGCCGCTT GTGCCGACCT ACCATTAGTC
ACAGGGGGTT CAGGGATCGC CTTGGGATTG CCGGAGAACT TTAGAAAAAA AGGGCTCCTC
AAGATTATTG GTGATGCCAG TAAGCTTGGG ACGGTTCGCG GCTTAAAGGC CGTCATTGCA
GGAAGCTGCT CTGTTGCCAC TCAAGAGCAA GTCAGGGCAA TGAAGGAGAA ATCCCCAGCG
TATTTTGTTG ATCCACTTGC CTTAGTCGAT GGTAGGGATG TCGTTACTGA GGCGCTCGAG
TGGGTTGCTC AAAAAATTGT GAAGGGCCCT GTATTGATCT ACGCTACCTC CAGTCCCGAG
ACTGTCAAAA GTATTCAAGA TAAAGTAGGT ATAGAGAAGG CTGGGGAGAT GGTGGAACAT
GCTCTGGCGC AAATTGCTAA AGGCCTTATC AAGCTAGGTG TTGGTCAGCT CATCGTTGCT
GGCGGTGAAA CCTCCGGCGC AGTCGTCAAG GCCTTGGGTA TTTCTGGTTT AAGAATAGGC
CCTGAAATAG CCCCTGGTGT ACCTTGGACT AAAGCCATTT TTACTGAAGT AAATCATGAC
CCCTTAGTGC TCGCCTTGAA ATCGGGTAAC TTTGGTAGCC CTCAATTCTT TAACGAAGCA
TGGGATTACA TCCAATGA
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| Protein sequence | MAVLLGCIAD DFTGGTDLAG MLVKSGMKTI QLIGVPTEPA PHDVDAVVIA LKSRTNPAPE
AIEESLRALE WLKSQGCQQF FFKYCSTFDS TPKGNIGPVA EALMKALDTK FTIACPAFPA
NKRSIYKGHL FVGDDLLSES GMRNHPLTPM TDSNLVRVLQ QQVQSKVGLT DYSVVKGGAG
VIQKRFADLR KDGNQFSIVD ALSDIDLYSI GAACADLPLV TGGSGIALGL PENFRKKGLL
KIIGDASKLG TVRGLKAVIA GSCSVATQEQ VRAMKEKSPA YFVDPLALVD GRDVVTEALE
WVAQKIVKGP VLIYATSSPE TVKSIQDKVG IEKAGEMVEH ALAQIAKGLI KLGVGQLIVA
GGETSGAVVK ALGISGLRIG PEIAPGVPWT KAIFTEVNHD PLVLALKSGN FGSPQFFNEA
WDYIQ
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