Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1626 |
Symbol | |
ID | 5053532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1694400 |
End bp | 1694933 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640471799 |
Product | superoxide dismutase, copper/zinc binding |
Protein accession | YP_001156404 |
Protein GI | 145589807 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2032] Cu/Zn superoxide dismutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCATGA ATCAAAAACA GTTATTGATC GCATTAACCG CTGTGGGAGT ACTTTCATTA CTTGCTTGCC AATCTATGGA GCAAGGCACC GGTCAAAAAG CAAGTGCAAG CCTAGAGTCA AAGTCAGGAT CTCAGGCAAA GGGCGAGGTT AATTTTGTAT GGCAAGAGAA TGATGTTTTG ATTAATGGAA AGTTCTCTGG CCTCAAGCCT AATTCTGAGC AAGGAATTCA CGTTCACGAA AAGGGAGACT GCTCTGCGCC TGATGCTACG AGCGCAGGTG GACATTTCAA TCCAGAAACA AAAATGCATG GCGTACCTGA TAGCGGCATG AATCATGCTG GAGATATGCC CAACATTAAA TCGGATGCAA ATGGTAACGC AGTATATGCA GCCAAGTTAC ATGGTTTTGC AGTGAACACA GGATCCAATG GAATTGTCGG CCGCGCAGTT GTTGTACATA AAGATCCGGA CGATTACAAA ACCCAGCCTG CAGGTAACTC TGGCCCAAGA ATTGCCTGTG GAGTGATTAA GTAA
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Protein sequence | MGMNQKQLLI ALTAVGVLSL LACQSMEQGT GQKASASLES KSGSQAKGEV NFVWQENDVL INGKFSGLKP NSEQGIHVHE KGDCSAPDAT SAGGHFNPET KMHGVPDSGM NHAGDMPNIK SDANGNAVYA AKLHGFAVNT GSNGIVGRAV VVHKDPDDYK TQPAGNSGPR IACGVIK
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