| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1608 |
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| Symbol | |
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| ID | 5053183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1675502 |
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| End bp | 1677037 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471781 |
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| Product | deoxyribodipyrimidine photolyase-related protein |
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| Protein accession | YP_001156386 |
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| Protein GI | 145589789 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3046] Uncharacterized protein related to deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCCC CTAAAAGGCT GGTCTTAGTT CTTGGCGACC AACTTGACCT AAATGGTGCT
GCACTTAAAA AATTAAACTT TGAAACAGAT GAAGTGTTCA TGGTGGAGTC GATAGATGAG
GCGCAGTACG TTTGGTCACA CCAAGCCAAG ATTGCCTTAT TTTTTTCGGC AATGCGTCAC
TTTGCACGGT CTTTGAGGGC GCTTAAGTAC CCGATCACTT ATATCGAAAA TACACCCTTA
TCTATTGTTG ATGCATTAAA AGAAAAGTTA CAGCAAGACA ATATTGGGCG CTTGATTTGT
ATTGAGCCTG GTGAGTGGCG CCTCAAGCAG CAGATAGAAA AATTAGCAAG CGAGTTATCG
ATTTCACTGG AGATGTGTGA AGATGACCAC TTCTTTTGTA CACATCAAGA GTTTATAGAT
TGGACTGCCG GCAAGAAAGA ATTGAGGCTG GAGTACTTTT ACCGCTTAAT GCGCAAGAGA
CACAATATAT TGGTTGATGC TGAGGGTAAC CCAGAGGGTG GTCAATGGAA CTTCGACCAA
GATAACCGTA AGCCCTACCC TAAAAAAGGT CCCGGCATGG TTGATGAGCC AGTCTTGTTT
GAGCCAGATG AGATTACGCA AGAGGTGATT GCATTCGTTA AGAGGACCTA CCCAAAACAC
CCGGGATCAT TAGAGGCATT TCGTTGGCCG GTAAATCGTG AGCAAGCATT AGAGGCGTTA
AATTATTTTG TGGAATATCG TTTACGCAAC TTTGGCGTGT ATCAAGATGC CATGTGGACT
GATACTCCTT ATGGCTGGCA TTCAATTCTA TCGAGCTCGC TCAATCTCAA ACTGCTCAAT
CCTCGAGAGG TCATTGCTGC CGTCCTCACA GCTTGGAAAA AATACGCTCT AGATTTATCA
ACGGTTGAAG GTTTCATTCG TCAAATTCTG GGATGGAGAG AGTTTGTCCG GGGGATGTAC
TACCTAGATA TGCCGGGAAT GGCACAAGAT AACTATTACG GACATGAGAG GGCTCTGCCT
AAATGGTATT GGGATGGCAA AACCAAGATG GCTTGTATGA AAGATGCGAT AGGCCAAACT
CTGGAATACG GTTATGCGCA TCACATTCAA CGCCTGATGG TGACAGGCAA TTTTGCTCTC
TTAGCTGAAA TCCTGCCGTC CGCAGTCTGC GATTGGTATT TAGCAATTTA TGTAGATGCA
ATTGAATGGG TGGAGTTACC CAATACGGCG GGTATGGCTT TGTTTGCAAA TGGCGGTCGC
TTCACTAGTA AGCCTTACAT CGCTAGCGGT GCCTACATCA AGCGGATGAG TAATTACTGC
GGTTCTTGTC AGTACAAGCC AGATGTCCGC TATGGTGAAA ATGCTTGTCC TATTACGACT
TTGTATTGGA ACTTTCTCAT TAAGCATCGA ACTCAGTTTG AATCTAGCCC ACGTACACGC
TTAATGACGG CCAACCTCAA AAGAATCAGT GATGAAGATC AGGGGCACAT TGTGGCGCAT
GCTGATCAGA TCCTTACTCA CTTAGACGAT CTATAG
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| Protein sequence | MKSPKRLVLV LGDQLDLNGA ALKKLNFETD EVFMVESIDE AQYVWSHQAK IALFFSAMRH
FARSLRALKY PITYIENTPL SIVDALKEKL QQDNIGRLIC IEPGEWRLKQ QIEKLASELS
ISLEMCEDDH FFCTHQEFID WTAGKKELRL EYFYRLMRKR HNILVDAEGN PEGGQWNFDQ
DNRKPYPKKG PGMVDEPVLF EPDEITQEVI AFVKRTYPKH PGSLEAFRWP VNREQALEAL
NYFVEYRLRN FGVYQDAMWT DTPYGWHSIL SSSLNLKLLN PREVIAAVLT AWKKYALDLS
TVEGFIRQIL GWREFVRGMY YLDMPGMAQD NYYGHERALP KWYWDGKTKM ACMKDAIGQT
LEYGYAHHIQ RLMVTGNFAL LAEILPSAVC DWYLAIYVDA IEWVELPNTA GMALFANGGR
FTSKPYIASG AYIKRMSNYC GSCQYKPDVR YGENACPITT LYWNFLIKHR TQFESSPRTR
LMTANLKRIS DEDQGHIVAH ADQILTHLDD L
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