Gene Pnuc_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1578 
Symbol 
ID5053584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1650383 
End bp1651429 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content41% 
IMG OID640471751 
Productarsenical-resistance protein 
Protein accessionYP_001156356 
Protein GI145589759 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0798] Arsenite efflux pump ACR3 and related permeases 
TIGRFAM ID[TIGR00832] arsenical-resistance protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAAG TTACCCAAAA ACTGTCATTT CTAGATCGAT ACCTCACAGT TTGGATTTTC 
GCTGCGATGG CAGTAGGTAT TGGCTTGGGA TTTTTTGTGC CGAGTATTGA GGGCTTTATT
AATCATTTTC AATCTGGTAC TACCAATATT CCTATTGCTA TTGGCTTGAT TTTGATGATG
TACCCACCGT TTGCTAAGGT GAAATATGAA GAATTGCCTG ATGTCTTTAA GGACAAGCGA
ATCTTTGGAT TGGCATTCTT GCTTAATTGG ATCGTAGCCC CAACCTTGAT GTTTTTCTTG
GCTATTACCT TTGTACCCAA TCAACCTGAA TATATGGCCG GACTGATTTT GATTGGTATA
GCGCCTTGTA TCGCAATGGT CATTGTTTGG AATGATATTG CCAAAGGCTC TACAGAGTAT
GCTGCAGGCT TAGTCGCATT TAATGCGGTA TTCCAAGTTC TATTCTTCAG TCTGTATGCA
TATTTCTTCC TGACTGTGTT GCCACCATAC TTTGGTTTCG CTGGTTCGGC AGTCAATATC
ACTATCGGTG AAATTGCTAA AACAGTTGCA ATTTACTTAG GCGTTCCTTG TGTAGCAGGA
TTTATGACTC GGTTTGTCAT GCTCAAGTTT GTTAGCAAAG AGTGGTATCA AAATATCTTT
GTGCCAAAAA TTGGCAAGAT TACCTTGATT GCTTTGCTCT TCACGATCGT AGTCATGTTT
AGTTTGAAAG GTAAGTTAAT TCTTCAACTA CCAATGGATG TGGTCACTAT TGCGATTCCC
TTGCTAGTGT TTTTTGTGGT GATGTTTGTA TTAACTTTCT GGCTCACTAT CAAAATGGGC
ATTGAGTACA AGCGTTGCTG TACTTTATCT TTTACAGCCT CTAGCAATAA TTTTGAGTTA
GCAATTGCTG TCGCTATCGC AGTTTTCGGG ATTAATTCAG GCGCTGCATT TGCGGCTGTA
ATTGGCCCCC TGGTTGAGGT GCCGATTATG GTGGGGCTAG TTTCAGTGGC GCTATGGCTT
AAAGAGAGGG TTTTTCAGGC GCAATGA
 
Protein sequence
MSQVTQKLSF LDRYLTVWIF AAMAVGIGLG FFVPSIEGFI NHFQSGTTNI PIAIGLILMM 
YPPFAKVKYE ELPDVFKDKR IFGLAFLLNW IVAPTLMFFL AITFVPNQPE YMAGLILIGI
APCIAMVIVW NDIAKGSTEY AAGLVAFNAV FQVLFFSLYA YFFLTVLPPY FGFAGSAVNI
TIGEIAKTVA IYLGVPCVAG FMTRFVMLKF VSKEWYQNIF VPKIGKITLI ALLFTIVVMF
SLKGKLILQL PMDVVTIAIP LLVFFVVMFV LTFWLTIKMG IEYKRCCTLS FTASSNNFEL
AIAVAIAVFG INSGAAFAAV IGPLVEVPIM VGLVSVALWL KERVFQAQ