Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1571 |
Symbol | |
ID | 5052470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1643718 |
End bp | 1644368 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640471744 |
Product | paraquat-inducible protein A |
Protein accession | YP_001156349 |
Protein GI | 145589752 |
COG category | [S] Function unknown |
COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAACCG GCGCCTCTCG CGGAATAATA GGGTGTGATA CTTGTGGCCT TGCTCAACGG GAAGCTCCCG AGGGTCCACA TATGGAGTGT GCACGCTGTG GCGCTGATAT GCATATACGT AAGCCCGATA GCATTACCCG CACCTGGGCA TTAGTCATCG CAGCCTATGT ATTGATTATT CCAGCCAATT TGATGCCAGT AATGGCTACT GGCTCTCTCT TTGGCACCGA AAAAGATACG ATTTTTGGCG GGGTGGTGTA TTTGTGGACT TCAGACTCAC AGGTGCTAGC TATCATCCTA TTTTGCGCCA GTATCATCAT CCCATTCGCC AAGTTATTTT CTTTAACTTT CCTCTTGATT TCAGTGCAAT TACGCTCGAC CTGGAAACCT AGAATGCGTG CGAAACTCTA TCGTATGGTG GAGGCAATCG GGCGCTGGTC GATGATTGAT GTCTATGTTG CTACTATGCT TACTGCGCTC GTACAATTTG GTAACTTAAT GTCGATTCGG GCGGGTGGTG GTGCAATTGC TTTTGCAACA GTAGTAGTCC TGACAATTTT TGCTGCAAAG AGTTTTGACC CCCGGATAAT ATGGGATGCC GCGGGCCTTT CAAATAATAA CGAGATGATT GCTGAGGAAT TGCATGTCTG A
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Protein sequence | MITGASRGII GCDTCGLAQR EAPEGPHMEC ARCGADMHIR KPDSITRTWA LVIAAYVLII PANLMPVMAT GSLFGTEKDT IFGGVVYLWT SDSQVLAIIL FCASIIIPFA KLFSLTFLLI SVQLRSTWKP RMRAKLYRMV EAIGRWSMID VYVATMLTAL VQFGNLMSIR AGGGAIAFAT VVVLTIFAAK SFDPRIIWDA AGLSNNNEMI AEELHV
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