Gene Pnuc_1520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1520 
Symbol 
ID5052444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1593268 
End bp1593846 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content41% 
IMG OID640471693 
ProductYceI family protein 
Protein accessionYP_001156298 
Protein GI145589701 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAAA ATAAACTTAT TAGTACATTC TTTATTGCAA CACTTTCTGT CTTAACCATT 
TTTTCAAGCA GTCTTTGTGC TGCTGAATAT ACGGCTATTG ACCTGGGTAA AAGCAAAATT 
ACTTTTACTA GTAAATTGAT GGGCTCAAAA CTCTCGGGTA GCTTTGGAAA GTTTTCTGGA 
AAAGTAGTTT TTAATTCGGA TGAACCAGAA AAAGCCAAAG CCAACTTGGT GATTGACCTT 
TCTAGTTTTA ATGCTGGTGG CGAAGAGTTG CAAGACGAAG CAAAAGGTAA GGATTGGTTC 
AATACTAAGC TTTATCCAAG CGCCAATTTC GTTTCAGAAT CTGTGAAGGT GGTTAGCAGC 
GGTAACCTTG AAATACACGG CTCGCTTACC ATGAAAGGTA AGTCTGTCCC AGTACTTGTG 
GCTGCTAAGT ATCAAGCTCA AGGCAAACAA ATGGTATTCG ATGCCACTTT TCAGCTATTG 
CGCCTGGACT ATGCCTTAGG TACAGGAACG TGGTCTGATA CAGCAGCCGT GGCAAACGAG 
GTGCCGGTTA AGGTCATTCT CGTGCTCAAT CAAAAATAA
 
Protein sequence
MMKNKLISTF FIATLSVLTI FSSSLCAAEY TAIDLGKSKI TFTSKLMGSK LSGSFGKFSG 
KVVFNSDEPE KAKANLVIDL SSFNAGGEEL QDEAKGKDWF NTKLYPSANF VSESVKVVSS 
GNLEIHGSLT MKGKSVPVLV AAKYQAQGKQ MVFDATFQLL RLDYALGTGT WSDTAAVANE 
VPVKVILVLN QK