| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1494 |
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| Symbol | |
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| ID | 5052421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1569559 |
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| End bp | 1570128 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471667 |
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| Product | BadM/Rrf2 family transcriptional regulator |
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| Protein accession | YP_001156272 |
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| Protein GI | 145589675 |
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| COG category | [K] Transcription |
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| COG ID | [COG1959] Predicted transcriptional regulator |
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| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGACTTA CAACCAAAGG TCGTTTTGCA GTAACCGCAA TGATAGATTT AGCCCTGCGT
GAAACGCATG GCCCTGTAAC TTTGGCTGGA ATTAGCCAAA GACAAAAGAT TTCCCTTTCT
TACCTCGAGC AGTTGTTCGG CAAATTGCGC CGCTTCAACA TCGTAGAGAG TACTCGTGGA
CCTGGGGGTG GATATACCTT AGCGCGGCCA TCTAATGAGG TGAGTGTTGC AGACATCATC
GTGGCTGTTG ATGAGCCCTT AGATGCTACC CAATGTGGTG GCAAAGGAAA TTGTCATAGC
GAAGAAGACA CTCATGGTCG TTGTATGACA CATGATCTGT GGAGCAACCT CAACTCCAAG
ATGGTGGAGT ACTTAAGTTC AGTGAGCTTA AAAGATTTAG TGCAGCAGCA AGAAGGGCGC
GGTATTGTGA TTCAAGATAT GCGCCAAAAG AAAATGAAAG TTGACGGTGT AAAAGCGGAA
AAGCCAGCTC CTGCATTGGC AGCAAAAAAA GAGATTGCAC CAAAAGCGCA TTTAGTTAAT
TCTGTTTTTA ATTTGGTGCG ACAAACCTAG
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| Protein sequence | MRLTTKGRFA VTAMIDLALR ETHGPVTLAG ISQRQKISLS YLEQLFGKLR RFNIVESTRG
PGGGYTLARP SNEVSVADII VAVDEPLDAT QCGGKGNCHS EEDTHGRCMT HDLWSNLNSK
MVEYLSSVSL KDLVQQQEGR GIVIQDMRQK KMKVDGVKAE KPAPALAAKK EIAPKAHLVN
SVFNLVRQT
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