| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1487 |
|---|
| Symbol | |
|---|
| ID | 5052989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | - |
|---|
| Start bp | 1563254 |
|---|
| End bp | 1564474 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640471660 |
|---|
| Product | oxidoreductase, molybdopterin binding |
|---|
| Protein accession | YP_001156265 |
|---|
| Protein GI | 145589668 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2041] Sulfite oxidase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCAG AAAACTTTAC AAATAGACGT AAGGTCATAA CGGCTGCTCT TGCAGGTGGC
GTAAGTTCTT TATTGCCATC TTGGGCAAGT AGCGCAGAGA TGATTAATAT GCCAATGGCT
TACGGGGAAA GAGAATTAGT AGCATTCCCA GGAAAAAAGC CAATGATTGT TTTAACATCT
CGGCCGCCTC AACTGGAGAC ACCATTTAAG TATTACGATC AACATGTGAT CACGCCAAAT
GATGAATTTT TTGTGCGATA TCACATGGCT GGCATCCCCA CTTCAATTGA TCCAAACACA
TACAAATTAA AGGTAGGTGG AAATGTAGAG AAGCCTTTAG AAATTTCCCT CTCTGAGCTT
AAGAAGAATT TTCCTTCACA GCGAATTGTT GCGGTAAATC AATGCTCTGG TAATAGTCGT
GGTTTATTTG AGCCAAGAGT AAATGGCGGA CAACTTGGTA ATGGCGCGAT GGGTAATGCT
GCTTGGGTTG GCATCTCATT AAAAGATATC TTGAATGCTG CAAATCCAGG AAAGGGATCA
AAGCAAGTGA CCTTTAATGG CCTGGATCAG CCAGTGCTGC CTAGTGATTC TGATTTTGTA
AAAGGCTTGG ATATCGACCA TGCAATGGAT GGCAATGTCA TGGTTGCGTA TCAAATGAAT
GGAACAGATA TTCCATTTCT CAATGGATAC CCAATTAAGT TAATTGTTCC TGGCTATTAT
GGAACTTACT GGGTAAAGCA CCTGAGTGAA ATTCAGGTGG TCAATGACGT CTACAACGGT
TATTGGATGA ATCCAGCGTA CCGAATTCCA GATAACGACT GTAATTGCGT GGAGCCAGGA
ACAGCGCCAT CAAAGACGAT CCCCATCAAC CAATTCACCA TTCGCTCTTT CATTACTAAC
TTTACTAACA GCAGTATCGT CACTGTTGGT AAACCAGTCC AAGCCAGGGG GGTTGCTTTT
GATGCTGGTT ATGGCATTAA AAAGGTATTG TTCTCACAAG ATAATGGGCA GAATTGGGTT
GAGGCTAGAT TGGGGCAAGA TTTAGGACGC TTTTCATTTA GAGAATGGCG CGTTGAATTT
ACTCCAAAAC AACAAGGTGT TCTGGACTTA AGGGTTCGCG CATTTAATCA CGCAGGACAA
GTGCAGCCGA TGACGGCTAC ATGGATGCCA GCGGGCTATA TGCGTAATGT GGTTGAGACA
GTTCAGATCA ATGCGGTGTG A
|
|---|
| Protein sequence | MNSENFTNRR KVITAALAGG VSSLLPSWAS SAEMINMPMA YGERELVAFP GKKPMIVLTS
RPPQLETPFK YYDQHVITPN DEFFVRYHMA GIPTSIDPNT YKLKVGGNVE KPLEISLSEL
KKNFPSQRIV AVNQCSGNSR GLFEPRVNGG QLGNGAMGNA AWVGISLKDI LNAANPGKGS
KQVTFNGLDQ PVLPSDSDFV KGLDIDHAMD GNVMVAYQMN GTDIPFLNGY PIKLIVPGYY
GTYWVKHLSE IQVVNDVYNG YWMNPAYRIP DNDCNCVEPG TAPSKTIPIN QFTIRSFITN
FTNSSIVTVG KPVQARGVAF DAGYGIKKVL FSQDNGQNWV EARLGQDLGR FSFREWRVEF
TPKQQGVLDL RVRAFNHAGQ VQPMTATWMP AGYMRNVVET VQINAV
|
|---|
| |