Gene Pnuc_1478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1478 
Symbol 
ID5052986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1555643 
End bp1556122 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content44% 
IMG OID640471651 
Productdisulphide bond formation protein DsbB 
Protein accessionYP_001156256 
Protein GI145589659 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1495] Disulfide bond formation protein DsbB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAT CCCAATACCT ATACCTTTCT TTATTGAGTC TCGCCTTAGT GGCATTTGCG 
GTAATACTGC AGCAGGTCGG TTACCAGGGC GTAAGTTTTT TGCCCTGCCC CTTATGCATT
TTGCAAAGAG TAGGCTATTT AGGTATCGCC ATCTGCTGTA TTTTGGCAGT CGGCGTTCAG
CCATTAAGAA AGTTTTTTCA TGGGCTAGCC ATTATTGCTG CAGGATATGG GTTGTCTGTG
GCCGCACACC AAGTATGGCT GCTTTCGCAT CCAGAAAGCT CCTGCGGCAT CGATCCTTTA
GAAACTTGGA TTAATCAATT TCAGTTGGCT CAAGGACTGC CATGGCTATT TAAAGCAGAT
GGATTGTGTT CTGCGCAGTT GCCATCAATT TTGGGCTTAC AAGTACCAGA ATGGTCTTTG
CTTTGGTTTG GTATTTTCTT GGCGGTGTTG CTAGTTACTT TTTTTCGCAA GCAAAAATAA
 
Protein sequence
MSKSQYLYLS LLSLALVAFA VILQQVGYQG VSFLPCPLCI LQRVGYLGIA ICCILAVGVQ 
PLRKFFHGLA IIAAGYGLSV AAHQVWLLSH PESSCGIDPL ETWINQFQLA QGLPWLFKAD
GLCSAQLPSI LGLQVPEWSL LWFGIFLAVL LVTFFRKQK