Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1440 |
Symbol | fabZ |
ID | 5052797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1510850 |
End bp | 1511299 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640471612 |
Product | (3R)-hydroxymyristoyl-ACP dehydratase |
Protein accession | YP_001156218 |
Protein GI | 145589621 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
TIGRFAM ID | [TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00460863 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAACC CTATCGCGAT TGATATCCAC AAAATTTTGC AGTTATTGCC ACATCGCTAT CCATTTTTAC TGGTAGATCG CGTTCTGGAA ATAACGCCTC GCGAAACCAT TACCGCCTTA AAAAATGTCA CGATGAATGA GCCATTCTTT CAGGGGCACT TTCCTGATTT CCCGGTGATG CCTGGAGTAT TAATTATTGA GGCGTTAGCT CAAACAGCTG CATTGCTAAC ATTTTCCGAA GAGCGTGCTG AAGATGCAAT TTATTACTTT GCTGGTATTG ATGGTGCCCG TTTTAAAAAA CCAGTACTTC CCGGTGATCA ATTGATTATG ACTGCGAGGC TAGAGCGTGG TCGCGCAGGT ATTTATAAGT TCGCAGTTCA GGCAACTGTG GATGGTGAAA TCGCTGCAGA AGCCAATATT ACTTGTGCGG TACGTTCGAA AGGCGCGTAA
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Protein sequence | MSNPIAIDIH KILQLLPHRY PFLLVDRVLE ITPRETITAL KNVTMNEPFF QGHFPDFPVM PGVLIIEALA QTAALLTFSE ERAEDAIYYF AGIDGARFKK PVLPGDQLIM TARLERGRAG IYKFAVQATV DGEIAAEANI TCAVRSKGA
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