Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1432 |
Symbol | |
ID | 5052240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 1501823 |
End bp | 1502635 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640471604 |
Product | integrase catalytic subunit |
Protein accession | YP_001156210 |
Protein GI | 145589613 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAAGTTA TTTTGCTGGC AGCCCAAATG CCTAAAAGCG TGTATTACTA CTGGCAAAAA GCCAGTAGTA ATACTGACCC CCATGCCAAT GCCAAGATCG AGATCAAGGC CATCTTCAAT ACCCATCAGG GTCGCTATGG CTACCGGCGA GTCCATTTAG AGCTTCGCAA TCGGGGGCAA TACCTCAATC ACAAGACAGT ACAAAAGCTC ATGGGGCAAC TTGGACTCAG GTCTATGGTT AGGCCTAAGC GCTATCAGTC CTACAAAGGA GGGGTTGGTA AGGCGGCCCC CAATTTGCTA GAGCGCAACT TTAGAGCAAG TAAACCGAAT CAAAAATGGG TCACTGATGT AACGGAGTTC AGCATCAGGG GGCAAAAGGT CTATCTCTCA CCCATCCTAG ACCTTTATAA CCAAGAGATC ATCTCGTATG AGATTGGTGA TCGGCCTCAA CTGAGTATGG TGACTACCAT GCTTAGCAGC GCTTTTAAAC ATCTCAAGCA GGCTGATAAG CCGATGCTGC ACTCAGACCA GGGCTGGCAA TATCAGATGG GGTTTTATCA ACAAGCCTTA AAGAAACAAG GTGTTACTCA AAGCATGTCT AGAAAAGGTA ATTGCTTAGA TAACGCCGTG ATGGAGAACT GGTTTGGGAT TATGAAAACC GAGTTCTTCT ATCCGAAGAG GTTTGAGACT ATTGAATCAT TTAAACAAGG GCTGCATGAA TATATCCACT ACTACAACCA TGATCGGATC AAACAAAAAC TAAAAGGATT GAGTCCGGTG CAATACCGAA CTCAATCCCT CGTGCTAACC TAG
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Protein sequence | MQVILLAAQM PKSVYYYWQK ASSNTDPHAN AKIEIKAIFN THQGRYGYRR VHLELRNRGQ YLNHKTVQKL MGQLGLRSMV RPKRYQSYKG GVGKAAPNLL ERNFRASKPN QKWVTDVTEF SIRGQKVYLS PILDLYNQEI ISYEIGDRPQ LSMVTTMLSS AFKHLKQADK PMLHSDQGWQ YQMGFYQQAL KKQGVTQSMS RKGNCLDNAV MENWFGIMKT EFFYPKRFET IESFKQGLHE YIHYYNHDRI KQKLKGLSPV QYRTQSLVLT
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