| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1409 |
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| Symbol | |
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| ID | 5053960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1480239 |
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| End bp | 1481720 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640471581 |
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| Product | glycosyltransferase |
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| Protein accession | YP_001156187 |
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| Protein GI | 145589590 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCACC AATCCCCATC AAGCTGGGCA GTAATCTGCG TCTGCATAGC AGCTGTTGTT
CATTTTGCCT TGGGATTTTC AATCGAGTTT TCTGTAGATG AAGCTCATTA CGCCTTGTAT
GCGCAACATT TAGCTTGGAG TTATTTTGAT CATCCGCCTT TAGTAGGCTG GATTCAGTGG
CCTCTTGTAA CGCTCACATC TTCTGAAGGG CTAATTCGCC TGATTCCAGA ATTACTATGG
ATACTTTCTT GTTATTTGGT TTATCAAGTA ACGCTCGAGG TGCATCACCT GATACAAGGC
CGAAATGCAG GCTATCTAAC TAGCGCGCTT CCCTCGCCAA ATACCTGTGG CCTGATGGCA
GTACTTGCCG TCATCGCTGC CCCTATACCC CATGTATTGG CAATCGGACT ATTACCCGAC
ACCTTACTAA TACCTCTTAG CCTCGGATTG ATGTGGATGG CTTTGCGCTG GCTCATTAAA
GATCATTTCA CTTTGGCCGA TTGGGTGCTC ACTGGAGTTT TATTGGGCCT AGCTGGTCTT
AGCAAGTACA CCGCCGCCTT TACTGCGATT GCACTTTTAT TTGTATTTAT AAGCGCTCCC
CGTAAGGTTT GGATCAGTCA AGCGGGGTTC TGGTTTGCCG CTCTCATTGC TCTCGCCTTC
ATCACTCCAG TGTTGTATTG GAATTACGTC AATGACTGGA TTTCCTTCAA ATATCAAATC
GCTCACGGGG CTGGCAGTAG CTGGCTGTGG CGCAGATTAG CCGCTTACAT TGGGGTGCAG
ATCTTGGTAT ATGGACCTCT TCTTGTTCTA GGTGCATTTC TCTTTCTGAA AAATTGTCTT
CAGACCACCA AGCTTGCGCT ACTAAGTCTG TTGGGATTTT TTGTCATTCC CTTTGCAATT
TTTACTGGCC TCTCGGGTGG TGGTGGCCTT CCTCATTGGA CTTCGCCTGC GTGGTTTTGT
CTTGCCCCCT TCGCGGGAAT TGGATTGGCG AAAGCATGGA CAGCTCAACA ACATCGCTTA
ATCCGTTTTC TATTTATTTT TCAGCTTGCT CTCTGTTTCA TCGGCTTTGG ATTTGTTTTG
TCTGGAGGGA TTAACTCTGA TCTAGTGAAG TCCAACCCGA TAGCAGATCT CTATGGCTGG
AAATTGGCTG GTGAAAAAGC AGCTCAATTA TCGAAAGCAA ATAAAGCAAG CGGCATAGCC
GTACAAAACT GGACCTTAGG TAGTCGCGCT GCTTGGTACG CAAGACCAAC TCCTGTGTTT
GTGCTGGATG ATCGCCAAGA CCAATTTGAC CTCTGGTTTG GCAAGCTACC CAAAGGGGCA
AATATCCTCC TAGTGAACTG GTCTGGAATG TCGTTTTCCC CTCCCATTAG GAGTAAAAAT
GGCTTCGAAC ATTGCGCCCC ACTAGAGTCA CTAGAAATCA AGCGATTGGG TCAAAGTCTT
TCCACGTTTG ACTTTAGCCT TTGTAGTAAC TGGCAGGACT AG
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| Protein sequence | MRHQSPSSWA VICVCIAAVV HFALGFSIEF SVDEAHYALY AQHLAWSYFD HPPLVGWIQW
PLVTLTSSEG LIRLIPELLW ILSCYLVYQV TLEVHHLIQG RNAGYLTSAL PSPNTCGLMA
VLAVIAAPIP HVLAIGLLPD TLLIPLSLGL MWMALRWLIK DHFTLADWVL TGVLLGLAGL
SKYTAAFTAI ALLFVFISAP RKVWISQAGF WFAALIALAF ITPVLYWNYV NDWISFKYQI
AHGAGSSWLW RRLAAYIGVQ ILVYGPLLVL GAFLFLKNCL QTTKLALLSL LGFFVIPFAI
FTGLSGGGGL PHWTSPAWFC LAPFAGIGLA KAWTAQQHRL IRFLFIFQLA LCFIGFGFVL
SGGINSDLVK SNPIADLYGW KLAGEKAAQL SKANKASGIA VQNWTLGSRA AWYARPTPVF
VLDDRQDQFD LWFGKLPKGA NILLVNWSGM SFSPPIRSKN GFEHCAPLES LEIKRLGQSL
STFDFSLCSN WQD
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