Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1405 |
Symbol | |
ID | 5053628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1476125 |
End bp | 1476772 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640471577 |
Product | hypothetical protein |
Protein accession | YP_001156183 |
Protein GI | 145589586 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1392] Phosphate transport regulator (distant homolog of PhoU) |
TIGRFAM ID | [TIGR00153] conserved hypothetical protein TIGR00153 |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCTTCA GCAAATTAAT GCCTCACGAT GGTAATTTCT TCGTATTATT CAATGAGCAT GCTGGGCATA TCGTTGCCGC TTCAGAATCT TTTTTAAAGT TCGTCGAGCA TTACAACGAT GAAGTGTTGC GTGCAAAATA TACGCAGGAA GTTGATAAAG CTGAACATGC TTGTGACGAT GTGGTGAAAG AAGTGCATCG CCGTTTACAC AAGACTTTTA TTACTCCAAT CGATCGCGAT CAAATTTTCT CACTCATCAA TACGATGGAT GATGTAGCCG ACCTATTGCA AAACGGTACC GAGGCAATGC ATTTGTATGA TGTTAAGCAA ATGACAGCAG AAATGATTCA AATGGCTGAG CTTTGTAATC AGTGCTGTAT CAGTATGAAA AATGCAGTTG CTACCTTAAA AGATATTTCT GATCCTGAGG TTGCAAAAGC TGCATTAAAA ACTTGTGATG AAATCGATCA TTTAGAGTCT AATGCTGACC GCCTTTTATC TACTGCGATC ACACGTTTAT TCCGTGAGGA CATCGAGGTG CGTGAGCTCA TTAAATGCCA GCGCATTTAC GAGCTGCTTG AAGAAGTTAC TGATAAATGC GAGGATGTTG CCAATTTGGT TGAAGGCATC GTTCTTGAAA ATTCTTAA
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Protein sequence | MFFSKLMPHD GNFFVLFNEH AGHIVAASES FLKFVEHYND EVLRAKYTQE VDKAEHACDD VVKEVHRRLH KTFITPIDRD QIFSLINTMD DVADLLQNGT EAMHLYDVKQ MTAEMIQMAE LCNQCCISMK NAVATLKDIS DPEVAKAALK TCDEIDHLES NADRLLSTAI TRLFREDIEV RELIKCQRIY ELLEEVTDKC EDVANLVEGI VLENS
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