| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1389 |
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| Symbol | |
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| ID | 5053705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1459233 |
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| End bp | 1460417 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640471561 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001156167 |
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| Protein GI | 145589570 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATAC GTCCTTTAGA TGGCATTACC GTTGTATCAC TTGAGCACGC GATTGCAGCG
CCCTTCTGTA CCCGTCAACT GGCAGACCTA GGTGCTCGAG TAATTAAAGT AGAACGGCCC
GGTAGTGGTG ATTTTGCAAG GGCTTACGAT AAACAAGTGA AAGGTCTGTC ATCTCATTTT
GTTTGGGTGA ATCGCTCTAA AGAAAGCTTA ACCCTAGATC TAAAACAGCC AGCTGCATTA
GCAGCATTAA AAACCCTGCT GAAAACGGCT GATGTATTGG TGCAAAACTT AGCGCCTAGC
GCAGCTGCCC GCATGGGCCT GACTGCGGAT TTACTGCAAA AAGAGAATCC GAAATTGATT
CTGTGTGATA TCTCAGGCTA TGGCAATAAT GGTCCTTATC GTGATAAGAA GGCATATGAC
TTACTGATCC AAAGCGAGGC TGGTTTCTTA TCGGTTACGG GTACTCCAGA AACCCCAAGC
AAGGCGGGAA ACTCCATAGC TGACATTGCT GCGGGTATGT ATGCCTATAC CAATATCTTG
GCGGCACTCC TGCAAAGAGG CAAAACGGGT AAGGGTTCAG TCATTGATAT ATCCATGCTC
GAATCTTTAG GTGAGTGGAT GAGTTTTCCG ATGTACTACG CATATGAAGG TGCCGAACCA
CCTCCGCGCA ATGGCGCCTC GCATGCCACC ATCTATCCTT ATGGCCCCTT TAAAGCTGGG
GATGGTGGGA CTGTAATGCT TGGCCTACAG AATGAGCGTG AATGGACTCA ATTTTGTGAA
GTGGTTCTTG AAAAATCAGC ACTTGCTCAA GATGAGCGTT TTGATAAAAA CTTCAAGCGC
AATGAAAAAC GGGTTGAGCT CTTGGCCATC ATTGATCAAT GCTTCAAAAC ATTAAGCACT
GAACAGCTGA TCGCCAGATT AGAAAAAGCG CAGATTGCCA ATGCTCGATT AAATGATATG
CACGGCCTGT GGAAGCATGA GCAATTGCAA GCCCGCAATC GCTGGGCTAA AGTCGATACG
CCAGCAGGAA GCATTCCAGC GCTCCTGCCG CCCGGATTAA ACAATAGTTA TGAGTACCGA
ATGGATGCCA TTCCGGCAGT AGGTCAGCAT ACTGAGTCAA TCCTCCAAGA AATTGGTTTA
AACGATTCTA ATATTGCCGA GATGCGCGCA AGCGGGGCGA TTTAA
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| Protein sequence | MSIRPLDGIT VVSLEHAIAA PFCTRQLADL GARVIKVERP GSGDFARAYD KQVKGLSSHF
VWVNRSKESL TLDLKQPAAL AALKTLLKTA DVLVQNLAPS AAARMGLTAD LLQKENPKLI
LCDISGYGNN GPYRDKKAYD LLIQSEAGFL SVTGTPETPS KAGNSIADIA AGMYAYTNIL
AALLQRGKTG KGSVIDISML ESLGEWMSFP MYYAYEGAEP PPRNGASHAT IYPYGPFKAG
DGGTVMLGLQ NEREWTQFCE VVLEKSALAQ DERFDKNFKR NEKRVELLAI IDQCFKTLST
EQLIARLEKA QIANARLNDM HGLWKHEQLQ ARNRWAKVDT PAGSIPALLP PGLNNSYEYR
MDAIPAVGQH TESILQEIGL NDSNIAEMRA SGAI
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