Gene Pnuc_1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1387 
Symbol 
ID5053335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1457345 
End bp1457848 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content48% 
IMG OID640471559 
Producthypothetical protein 
Protein accessionYP_001156165 
Protein GI145589568 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCATG CACTTCAGCA TTTTTTTGCG TGGTTTGAAA TGCCTTCGGT GGGATTGCCC 
GCTGTTTTTT TAAGCGCATT CATTTCGGCA ACCTTATTGC CCGTCGGTTC AGAACCCATT 
CTTTTTGGGT ACATTTCGCT TAATCCCCAT CTCTACTGGG TTGCCATCAT AGTGGCAACA 
GTGGGTAATA CCCTTGGCGG TATGTTGGAT TGGGGGCTTG GATTGCTCGC GCGCAAGGGA 
ATGAAGTCTG TTGGTGAGCC CAAAGATCAT CGTCTAAAGC GCTTGCTAAG CAGTTGGGGG 
CCAAAAATGC TCTTGCTCTC ATGGCTCCCG GGGTTTGGAG ACCCGCTTTG TTTGGCTGCT 
GGATGGTTAA AGCTAGCTTG GCAGCCATGC CTGGTTTATA TGTTTATAGG CAAACTAATG 
CGTTATCTGA CCTTAACCTG GCTATTAACA TTGGTCCCGG ACAGTTATTG GCACCAATTA 
GGTCATTGGT TGCATCTGAT CTAA
 
Protein sequence
MEHALQHFFA WFEMPSVGLP AVFLSAFISA TLLPVGSEPI LFGYISLNPH LYWVAIIVAT 
VGNTLGGMLD WGLGLLARKG MKSVGEPKDH RLKRLLSSWG PKMLLLSWLP GFGDPLCLAA 
GWLKLAWQPC LVYMFIGKLM RYLTLTWLLT LVPDSYWHQL GHWLHLI