| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1375 |
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| Symbol | |
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| ID | 5053645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1446017 |
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| End bp | 1446952 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471547 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001156153 |
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| Protein GI | 145589556 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.58375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTATC TACCGTCATT GAAGCAATTA ACGTATTTAG TGGCTTTAGC TAAAGAGCTC
AATTTCACTC GTGCTGCAGA GTCGTGTTTT GTAGGGCAAT CAACTTTAAG TGCCGGCTTA
AAAGAATTAG AAGATGGGCT TGGTATTCAT TTAGTTGAAC GGGATCGGCA AAATGTGTCG
ATCACTCCAG CGGGGCAAGA GGTGCTCGAG CGTGCGAAAA CTATTTTGGC TGCCTCCCAG
GATTTAGTCG AATATGCCGG CGCCTCCGGA AAGCCGATGA CTGCAACTAT TCGATTGGGC
GTCATTCCGA CAATTGCACC TTTTTTGTTA CCGATTGTTT TACCGGAAGT GCGTAAACGG
TTTCCTGATC TCAAAATTAC TTTGAGAGAA GATTTAACGG CTAATTTGTT ATCAAGAATG
GCTGAGCATA AATTGGATTT TGCGTTGATT GCATTGCCTT ATGACACCAG CGGCTTACTT
GTGGAGGAGT TATTCGATGA TGACTTCTGG TTGGTTGCTA GGGCTGGTGA TCCAGCATTA
AAAGGAAAGG AAGTAACCTT GCCGGCCAAG ATGGCTGAGA GACTATTGCT CCTAGAAGAA
GGACACTGCT TAAGAGAGCA TAGTTTACAA GCGTGCAAGA AAGCCGATAT ACGCAAGGCT
GAAGGCATGG AAGCAACCAG CTTGCTGACC TTATTGCAAA TGGTGGAGTC AGGCTTAGGC
ATAGCATTGC TACCTGAGAT GGCTGTGAAA AGTAGTCTCT TAAATAGCAC TGAGTTAGTT
GCTAAAGCCT TAGCATCACC AGCACCAAAA AGGGTTATTG CACTAGTTGC CCGTGCTTCA
ACTGCACACG CCCAAGAATT TATTGCGCTC TCAAAATGTA TTCGAGAAAG GTTTAGCGCC
CATCTAAAGA ATGCGCCTGC ACGCCAAGAG GTATAG
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| Protein sequence | MAYLPSLKQL TYLVALAKEL NFTRAAESCF VGQSTLSAGL KELEDGLGIH LVERDRQNVS
ITPAGQEVLE RAKTILAASQ DLVEYAGASG KPMTATIRLG VIPTIAPFLL PIVLPEVRKR
FPDLKITLRE DLTANLLSRM AEHKLDFALI ALPYDTSGLL VEELFDDDFW LVARAGDPAL
KGKEVTLPAK MAERLLLLEE GHCLREHSLQ ACKKADIRKA EGMEATSLLT LLQMVESGLG
IALLPEMAVK SSLLNSTELV AKALASPAPK RVIALVARAS TAHAQEFIAL SKCIRERFSA
HLKNAPARQE V
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