Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1357 |
Symbol | |
ID | 5053538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1429317 |
End bp | 1430546 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640471529 |
Product | hypothetical protein |
Protein accession | YP_001156135 |
Protein GI | 145589538 |
COG category | [R] General function prediction only |
COG ID | [COG2081] Predicted flavoproteins |
TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.999189 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAAA CATGGGATGC CATCATCATT GGTGGTGGTG CAGCTGGTTT ATTTTGCGCA GGGGTAGCTG GCCAGTTAGG TAAAAGAGTT CTTGTCCTAG ACCACGCGTC AGTATTGGGT GAAAAGATTC GTATCAGCGG AGGGGGCCGC TGTAATTTCA CTAATTTACA TAGTAGCCCC GCAAACTTTC TTTCACTCAA CTCGCATTTC ATCAAGAGTG CTTTGGCGCG TTACCCTTCC AGTGAGTTTA TAAAGCTCGT GAATGCTCAT GGGATTAATT ATCACGAGAA ACATCAAGGG CAATTATTTT GCGATGATTC AGCAATGCAA ATTATTGAAA TGCTCATGAC AGAATGTAAA AAGGGTGGAG TCAAGATACG CTTTCCAGTG ACCGTAGAAA GTATTGCGCA AGATGCTAGC GAATGGCTTA TTCATACAAG CGACGGAGTT GAAAAAACCA AAGCGGTAGT AATGGCTACC GGTGGGTTAC CAGTCCCGGC GATTGGAGCC AGCGCGTACT CATTGGATAT TGCAAAACAA TTTGGGTTAT CAGTGGTGGA TCCGCGACCT GCTTTAGTGC CACTATCTTT TACAGCAGAG ACCTTTGGGA ATTTAAATGA TTTAGCTGGC TTAAGTGTTC CTGTCAGAAT TGCTGCGGGT TCAAAAGGTC ACCGTTATGG GGCTTGCCGT TTTAATGAAG ATCTCCTGTT GACTCATAAA GGATTATCTG GCCCCGGAGT GCTTCAGGCT AGTAGCTATT GGGTCGAGGG TGAGCCAATT CATATTGACT GGTTAGGCGC TATAGAACGA CCAGGTGGAT TTAACTGTGA TGTACTTTTC AATAACGATG AAAATCGCCT GAAATCAGCT GAAACTATTC TTGCGTCTGT TTTGCCGCAG CGATTGGCAA AAGCATTTGC TGAGCAAAAA AATCTCATGG GTCGCAAATG GGCTGAGGTC TCAAAAAAAG ATCGGCAGGC ACTCAAAGAG CTGATTACTA ATTGGTCTGT GAAGCCAGCG GGTACGCTTG GATGGAAAAA GGCTGAAGTG ATGTTGGGTG GCGTCGACAC TAAAGAGTTA GATAGTCAGA CGATGATGGC TCGCAACTAT CCTGGACTAT TCTTTATTGG AGAATGCGTG GATGTCACTG GACACTTGGG CGGCCATAAC TTTCAGTGGG CTTGGGCAAG TGGCTTTGCT TGCGCACAGG CGCTTAATTC TTTTTCTTAA
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Protein sequence | MSKTWDAIII GGGAAGLFCA GVAGQLGKRV LVLDHASVLG EKIRISGGGR CNFTNLHSSP ANFLSLNSHF IKSALARYPS SEFIKLVNAH GINYHEKHQG QLFCDDSAMQ IIEMLMTECK KGGVKIRFPV TVESIAQDAS EWLIHTSDGV EKTKAVVMAT GGLPVPAIGA SAYSLDIAKQ FGLSVVDPRP ALVPLSFTAE TFGNLNDLAG LSVPVRIAAG SKGHRYGACR FNEDLLLTHK GLSGPGVLQA SSYWVEGEPI HIDWLGAIER PGGFNCDVLF NNDENRLKSA ETILASVLPQ RLAKAFAEQK NLMGRKWAEV SKKDRQALKE LITNWSVKPA GTLGWKKAEV MLGGVDTKEL DSQTMMARNY PGLFFIGECV DVTGHLGGHN FQWAWASGFA CAQALNSFS
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