Gene Pnuc_1349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1349 
Symbol 
ID5053143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1423030 
End bp1424004 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content47% 
IMG OID640471521 
Producthypothetical protein 
Protein accessionYP_001156127 
Protein GI145589530 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAGAA ATATCCTCGT TTTTATCGCT GCAGGACTCT TTTCGTTGGT GGCGCTTGCC 
CAAAATACCT CTTGGCCGGC CCCAAATCGC CCTATTACCT TTATTAACCC CTTCCCCCCA
GGTGGGGCAG TCGACGCTTT TGGTCGCCCC TTGGCCAAGC AGCTTTCCAC CCAGTTAAAC
GACTCTATTG TTGTCGACAA TCGTGGTGGT GCTGGCGGAA CCTTAGGCGC GGCCGTAGCT
GCAAAAATGG CACCTGATGG ATATACCTGG CTACTGGGCG CAGTTCATCA CTCCATCGCA
CCGAGTATGT ATACGAATTT ATCGTATGAC ATCACCAAAG ATTTTGAACC GATTGCCATC
ATCGGAAGCG TTCCTCATGT GATTGTTGTC AATCCTAATA AATTTCCAAA AAATGATTTG
AAATCCATCA TCGAAGAGAT TCGAAAAAAC CCAGGTAAAT ATAACTATGC ATCTACCGGT
AATGGCACAT CTCAACATTT AACTGGCGAA CTGTTTAAGA TGAATAATAA ATTGTTCATC
ACCCATATTC CCTATCGTGG CACCGGTCCA GCATTGCAAG ATGTTGTCGC GGGTCAAGTC
GACATGATGT TTGATACCCT GGCTGGCGCT GCCCCATTTA TTAAAAGCGG ACAGCTCATC
GCCGTCGCTG TCGCAAGCAA CAAACGTAGC GAAGCCTTTC CGAATGTACC CACCGCGCAA
GAGCTAGGGA TCTCAAATTT TGTGGTCTCC AGTTGGTACG CGCTTTGGGC GATTAAGGGC
ACTCCAAAAG ATATCGTTGA TAAAATGAGT GCAGAGGTTC AAATAGCCTT AGCCTCACCT
GAGATCAAAG AGCGCTGGGC AAGTATGGGT GCAACAGTTC CTAAAATGAC TCGACCAGAG
TTAACGAATT ACATCAATCA AGAAATCACT CGTTGGCGAG AGGTTGTAAA ACAATCCGGT
GCTAAGTTGG ATTAA
 
Protein sequence
MIRNILVFIA AGLFSLVALA QNTSWPAPNR PITFINPFPP GGAVDAFGRP LAKQLSTQLN 
DSIVVDNRGG AGGTLGAAVA AKMAPDGYTW LLGAVHHSIA PSMYTNLSYD ITKDFEPIAI
IGSVPHVIVV NPNKFPKNDL KSIIEEIRKN PGKYNYASTG NGTSQHLTGE LFKMNNKLFI
THIPYRGTGP ALQDVVAGQV DMMFDTLAGA APFIKSGQLI AVAVASNKRS EAFPNVPTAQ
ELGISNFVVS SWYALWAIKG TPKDIVDKMS AEVQIALASP EIKERWASMG ATVPKMTRPE
LTNYINQEIT RWREVVKQSG AKLD