| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1345 |
|---|
| Symbol | |
|---|
| ID | 5052919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | + |
|---|
| Start bp | 1420923 |
|---|
| End bp | 1421987 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640471517 |
|---|
| Product | selenide, water dikinase |
|---|
| Protein accession | YP_001156123 |
|---|
| Protein GI | 145589526 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0709] Selenophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00476] selenium donor protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATACAG AAACACCTAG CAGCGAACCA CGCCTGACCT CTCTCTCACA TGGAGGGGGT
TGTGGCTGCA AAATTGCCCC TGGCGTTCTT TCTGACATCT TGCAGAGTGT TCCGCAATTG
CCTTTTCCAA AAGAATTACT CATTGGCATT GAAACTGCAG ATGATGCTGC GGTTTATCAA
ATTAATGAAT CGCAAGCAAT TGTTGCAACA ACAGATTTTT TCATGCCGAT TGTGGATGAC
CCCTTCGACT TTGGAAAAAT TGCTGCGACC AATGCGATTA GCGATATTTA TGCGATGGGT
GGCACACCCC TGTTTGCACT TGCATTAGTG GGTATGCCAA TTAAAGTGCT ATCCAATAAA
ACGATTGCTC GTATTTTAGA AGGTGGCGCT GAGGCCTGCC GTAGCGCTGG AATTCCAATT
GCTGGTGGTC ACACAATTGA TTCAGTCGAG CCTATTTATG GCTTAGTCGC AATAGGCCTA
GTAGATCCAA AGAATATAAA AAGCAATGCA AGCGCCCAAG CTGGCGATGT ACTGATTTTA
GGCAAGCCTC TTGGTGTCGG CATCTTATCT GCCGCCTTGA AAAAAGATTT GCTAGGACCC
GAGGGATATC GCGAGATGAT CGCCAACACG ACCAAGCTCA ATTCAGCAGG CCCTGAATTA
GCTAAACTCT CGGGTGTTCA TGCGCTAACT GATGTCACAG GCTTTGGTCT TGCGGGGCAT
ACCCTGGAAT TAGCAAAAGG ATCTGGATGT ACGGCCCATA TCGACTGGAG CCAAGTTCCC
CTACTTTCCA ATGTGCAAAC TTTGGCAGAT GACGGCGTCA TTACTGGCGC ATCTGATCGT
AATTGGGCAA GCTATGGTGA CAAGATTGGT TTACCTGCAG ATTTCACAAT CGCGCAGCGT
GCCTTGCTGA CGGATCCTCA AACTAGCGGT GGCCTTCTGG TTTCCTGCAG TCCTGATAGC
GTTCAAAATG TTTTAAATAT CTTTAGCCAG CATCAATTTT TAGGCGCCCG CGTCATTGGG
CAAATGAGCA AGCTACAAAA TAAACATGTT GTGATCTCTG CTTAG
|
|---|
| Protein sequence | MNTETPSSEP RLTSLSHGGG CGCKIAPGVL SDILQSVPQL PFPKELLIGI ETADDAAVYQ
INESQAIVAT TDFFMPIVDD PFDFGKIAAT NAISDIYAMG GTPLFALALV GMPIKVLSNK
TIARILEGGA EACRSAGIPI AGGHTIDSVE PIYGLVAIGL VDPKNIKSNA SAQAGDVLIL
GKPLGVGILS AALKKDLLGP EGYREMIANT TKLNSAGPEL AKLSGVHALT DVTGFGLAGH
TLELAKGSGC TAHIDWSQVP LLSNVQTLAD DGVITGASDR NWASYGDKIG LPADFTIAQR
ALLTDPQTSG GLLVSCSPDS VQNVLNIFSQ HQFLGARVIG QMSKLQNKHV VISA
|
|---|
| |