Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1342 |
Symbol | |
ID | 5052735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 1417880 |
End bp | 1419160 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640471514 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001156120 |
Protein GI | 145589523 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTATTTA CTGATCTCGG TTTATCTGAA CCCATTCTTC GCGCCATTGC AGAAGAGGGT TACACCAGCC CCACCCCCAT TCAAGCAAAA TCCATTCCTG CAGTACTCAA GGGCGGAGAT CTCTTAGCTG CAGCACAAAC TGGCACAGGC AAGACTGCTG GCTTTACGCT TCCTATATTG CAACGCCTAA GCTCTATCAA GGCAAGCTCA GGAAAGCGTG TGTTGCGCGT TCTGATTTTG ACTCCTACAC GTGAGTTAGC AGCCCAAGTA CAAGAATCCG TCGTTACTTA TGGCAAGTAC ACCGGCTTAA AGTCAACAGT CATTTTTGGT GGCGTTGGTG CAAATCCCCA AATCAAAGCC ATTGCAGCAG GTCTTGATAT TTTGGTTGCT ACCCCAGGTC GCTTGCTAGA TCTCATGTCT CAAAAATGTG TTTCACTGAA CGATATTGAG ATCTTGGTTT TAGATGAAGC GGATCGCATG CTAGACATGG GCTTCTTGCG CGATATTAAA AAGATATTGG CTGCGTTGCC TAAGCAACGT CAAAACCTCC TGTTCTCAGC AACCTTCTCT ACTGAAATTA AAGCGCTTGC CGATGGCCTA TTGAATAAGC CTGAGCTCAT TGAAGTGGCG CGAAGTAATA GTGCTAATGA AGCTATTGCA CAATTGATTC ATCCAGTCGA TAGAAATCAA AAACATCCTT TGCTGGCTCA TTTGATCAAG TCCAACGACT GGAAACAAGT TCTTGTATTT ACGCGCACCA AGCATGGAGC CAATAAGCTA GTTACTCAGT TAGAAAAAGA TGGCATTACG AGCATGGCGA TTCACGGCAA TAAAAGCCAA ACCGCACGCA CTAAAGCTTT GGCAGATTTC AAGGCAGGAA AGCTCACAGC ATTGGTGGCT ACCGATATCG CTGCACGCGG AATCGATATC GACCAACTAC CCCATGTGGT GAACTACGAT TTGCCAAATG TTTCTGAAGA CTATGTGCAT CGTATTGGCC GTACCGGACG CGCTGGCTCA AATGGTGTTG CAGTATCTCT AGTCTGCGTA GACGAACATC AAATGCTTAG AGATATCGAA AAACTCATTA AGCAAAAATT ACCGCAAGAA GTTATTGCAG GTTTTGAGCC TGATCCGAAT GCAATTGCTC AGCCTATTCA GTTGCGTAGC CAACAACATC AACAATCCAG AAGGCCAAAA GTAGCAGGAT CTGGTGGCGC ACCAGCCAAA AAGGCCCCCG CTAAACGCAG CAGCCCACCT AAAAGATCAT TTAACCGCTA A
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Protein sequence | MLFTDLGLSE PILRAIAEEG YTSPTPIQAK SIPAVLKGGD LLAAAQTGTG KTAGFTLPIL QRLSSIKASS GKRVLRVLIL TPTRELAAQV QESVVTYGKY TGLKSTVIFG GVGANPQIKA IAAGLDILVA TPGRLLDLMS QKCVSLNDIE ILVLDEADRM LDMGFLRDIK KILAALPKQR QNLLFSATFS TEIKALADGL LNKPELIEVA RSNSANEAIA QLIHPVDRNQ KHPLLAHLIK SNDWKQVLVF TRTKHGANKL VTQLEKDGIT SMAIHGNKSQ TARTKALADF KAGKLTALVA TDIAARGIDI DQLPHVVNYD LPNVSEDYVH RIGRTGRAGS NGVAVSLVCV DEHQMLRDIE KLIKQKLPQE VIAGFEPDPN AIAQPIQLRS QQHQQSRRPK VAGSGGAPAK KAPAKRSSPP KRSFNR
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