Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1310 |
Symbol | |
ID | 5053227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 1388231 |
End bp | 1389949 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640471482 |
Product | putative inner membrane transmembrane protein |
Protein accession | YP_001156088 |
Protein GI | 145589491 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCAAAC TCACCGCCGC CGCCACTAAA TCGATCCCGC GCATTATTAT TTTTGCGCTG ACATTGGTAT ATGGTTTTTC TGGCCTCTTC TTTCGTGATC CATGGAAAAA TGAAGATGCC ATTGGCTTTG GCGGTATGTG GTCTCTATTT CGTGGTAACT CGATTGATTG GGTCGTCCCT CACTTAGCAG GTCGCAACAT CTCTTTAGGC ACCCCACTTC CTTACTGGAT GGGTGCTGGT CTCATCGAAT TATTTGGTCA GTATATTGGC GCTGCAAATG CTGCTCGCTT ATATTCAGCG ATTTGCTTTT TCTCTGCTGC ACTGGCTATT TGGTATGCCA CTTACTTATT AGGTCGTCGG CGCGAAGTTC AGCCTATGGC GCTAGCAATG GGTGGACAGC CTGATTTAAA AAGCTATGGG ATGACGTTGG CTGATGGCGC TTTGCTCATC TTCTTGGCTT GCGTTGGCCT CGCTCAGCGC GCGCATGAAA CCACACCAAT GATGGCGCAA CTGATGGGCA TCAGTATTGT TCTTTACGGC ACTGTGCGCG GCTTAGATAA GCCTTGGCAA GGCGGTCTAT GGACAGGTCT AGGCATCACG ATTGTGGCTT TATCGAGCAA CCTCACCTTA AGCCTAATCA TTGTTACCTC CACGATCATC GCCGTCATTG CAAGTAATGC TAAGTTACGC TTTCGCTGGA CATTAGCAAG TACTGTTTTA GGCTTAATCG GCTTTGCGCT TTGGCCGATC ATCTGGTATT TGGCTGGTCT ACCAACAGAA TGGCGCCATA TCGCAGAAGA AGGTTGGCGC AATACTCCCG AGATGCGCTC CACTCCTTCA CTAGAATCGC TTGGGTTTTT AAGTATTAAT TTCTGGGCTT ACGCATGGCC TGTGTGGCCG CTAGCAATGA TTTCTTTAGC CCACTGGGGT CGAGTCAAGG CTGCAGGCGC ATGGCGTGCA CCACATCTTT GCATTCCCCT CAGTTTATTT ATTGGCAGCT TGATCTATGT AATTTTTCGT CTTGAGGCGA ATGAGCATGA TCTGATGATC TTGATACCAA GCCTTTCGAT CATTGCAGCA TTTAGCTTGC CGATTTTGAA ACGTAGTGTG ATTAGCTTTA TTGACTGGCT TGCCATGTTT AGCTTTACCT TGATTGCATT AGCGATTTGG ATTATTTGGC TAGCAAAAAT TACAGGCTAC CCTGAGACTA CTGCAGCTAA CATCACGCGC CTATTGCCAG GCTTTGAAAG TCAGTTCAAT TGGCTCGCGT TCATCGTGGC ACTAGCCATT ACCGGCGTAT GGTTGGCGAT CGTTCGCTGG AGAACATCGC GTGCCCCTAA GGAAATTTGG CGCTGCCTGA TCATTTCTGC GTCAGGCACC ACCTTAATGT GGGTTCTCCT GATGACTTTA TGGCTACCGA CGATTAACTA CGCCAAAACC TATCGCCCCG TGTCTGCGCG CCTCTCACAA GTAGTACCGC CAGGTGCTGG CTGCATCAAT ACCAGCAATA TTGGTATGGC GCAATTGGCC TCCTTTGACT ATTTCACCAA ACTCCCTTTG CGTGATGACC CCAACTGTCC TTGGATGCTG ACGCATAACC AAACTGAAGC TAAGGCCTAT GCGCAGCTGA ACAATAAGAA ACTTAATCTT CTCTGGGAAG ACCGTCGCGC AGCTGATCGT GACGAACGCT TACGGCTTTA CGAAGTCATT CCGGAATAA
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Protein sequence | MVKLTAAATK SIPRIIIFAL TLVYGFSGLF FRDPWKNEDA IGFGGMWSLF RGNSIDWVVP HLAGRNISLG TPLPYWMGAG LIELFGQYIG AANAARLYSA ICFFSAALAI WYATYLLGRR REVQPMALAM GGQPDLKSYG MTLADGALLI FLACVGLAQR AHETTPMMAQ LMGISIVLYG TVRGLDKPWQ GGLWTGLGIT IVALSSNLTL SLIIVTSTII AVIASNAKLR FRWTLASTVL GLIGFALWPI IWYLAGLPTE WRHIAEEGWR NTPEMRSTPS LESLGFLSIN FWAYAWPVWP LAMISLAHWG RVKAAGAWRA PHLCIPLSLF IGSLIYVIFR LEANEHDLMI LIPSLSIIAA FSLPILKRSV ISFIDWLAMF SFTLIALAIW IIWLAKITGY PETTAANITR LLPGFESQFN WLAFIVALAI TGVWLAIVRW RTSRAPKEIW RCLIISASGT TLMWVLLMTL WLPTINYAKT YRPVSARLSQ VVPPGAGCIN TSNIGMAQLA SFDYFTKLPL RDDPNCPWML THNQTEAKAY AQLNNKKLNL LWEDRRAADR DERLRLYEVI PE
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