| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1260 |
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| Symbol | |
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| ID | 5052287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1325567 |
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| End bp | 1326604 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640471431 |
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| Product | YVTN beta-propeller repeat-containing protein |
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| Protein accession | YP_001156038 |
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| Protein GI | 145589441 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.226766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATACAT TTAACAAGAT TAGAGGATTT CGCATACTTG CGACTTCCGC TGTATTTGCT
CTTCTGTTGG CGAATCAAAA TGCTTTTGCA CAGGCTGGCA ACCCTAGTTC CCCTTCAAAT
CCTGCCGCAC AACCAAAGTT AGCGGTAATT CTGAATTCGG GTGCAGCCTC TGTCAGTCTG
ATTGATATGA ATACACGCGA AGTGGTTAAA ACCATTCCCG TTGGTAAAGA GCCCCATCAC
TTGATGATGA CGCCGGATCA AAAAACCCTA TTGATTGCAA ATGCTGCCGG TAACGATGTT
GTTCTCATGA ATCCTACTAC TGGTGAGTTA ACCGGCAAGA TTCCAAACAT CATTGACCCA
TACCAAATTG GCTATTCACC GAATCACAAG TGGTTTATTG CAAATGGTAA TCGCTTGGAT
CGTGTAGATA TTTATTCTGC TGATAGCGCT AATCTGAAAT TAGTTAAAAC TCTTAAGTTA
CCTAAAACAC CAAGTCACAT TGCCTTTACA TCGGATAGCA AAATTGCTTT TATTACCTTG
CAAGATTCTA GTGAGTTGGC AGCAATTGAT CTAGAAACAC AAAATGTCTT GTGGGTAATA
CCCACTGGAA AAGTGCCCGC TGGTTTGTGG ATGACTCCTG GCGATCAATA TTTATTGGTT
GGCATTACTG GCGAAGATAA TGTACAAGTA TTTGACTGGA AAAATCGCAA GGAAGTAAAG
CGAATCTATA CAGGTAAGGG CGCGCATAAC TTCCGTCCAC TTGGGGATAA GAAGCATGTA
TTTGTGAGTA ACCGTATTGG TTCTACGATT AGCTTGATTA ATATGCAAAC CCTAGAAAAG
GTGGGAGATA TTACTGGCTT GCCAGCCGGC CCGGATGACA TGGAGATCAC GCCAGACGGC
AAGACCATGT GGGTCACTTT CCGTTTCTCG AAAAAGGTTG GCGTAATTGA TATCCCATCA
ATGAAGTTGG TGGCCGTTAT TCCGGTTGGT AAATCACCGC ATGGTGTGTT CTTCACTCCA
AGAGCAGGAT GGGAGTAA
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| Protein sequence | MYTFNKIRGF RILATSAVFA LLLANQNAFA QAGNPSSPSN PAAQPKLAVI LNSGAASVSL
IDMNTREVVK TIPVGKEPHH LMMTPDQKTL LIANAAGNDV VLMNPTTGEL TGKIPNIIDP
YQIGYSPNHK WFIANGNRLD RVDIYSADSA NLKLVKTLKL PKTPSHIAFT SDSKIAFITL
QDSSELAAID LETQNVLWVI PTGKVPAGLW MTPGDQYLLV GITGEDNVQV FDWKNRKEVK
RIYTGKGAHN FRPLGDKKHV FVSNRIGSTI SLINMQTLEK VGDITGLPAG PDDMEITPDG
KTMWVTFRFS KKVGVIDIPS MKLVAVIPVG KSPHGVFFTP RAGWE
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