Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1246 |
Symbol | |
ID | 5053534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1310267 |
End bp | 1311520 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640471418 |
Product | BNR/Asp-box repeat-containing protein |
Protein accession | YP_001156025 |
Protein GI | 145589428 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4692] Predicted neuraminidase (sialidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCGTG TCATCGCCTT ATGTTTTTTA TTGCTAGCTG CAGTGATCGG ATTTTTGCAT CTAGATAGTC GTCCAGTATG GGCACCGTTT ATAGACACTG AAACAATAGT GACCGAGATC GAGGCGGAAT CACCATTAAT CACTAAAGTA AAAGGCAGCA ATAAATCTGA TCCCATTGCT TCCAAGCCCC AGTTCAATTG GCTGCCTGAT ACAGGGACTA GTTCCGTACA CGCTGCTTCG TTAATTGCTT TAAAGGATGG TGGAATTCGT GCTTTCTGGT TTGCTGGCAG TCGAGAGGGC GCTCCAGATG TAGTGATCAA CACCTCCGCA TTAGACAAGT CTGGCAAGTG GAGTGCACCA GCAGTTGTGA TGGACAGGGT GACAGCGGAA AAGGGCTTGG GTCGCTATAT TGCCAAGCTG GGTAATCCAG TTCCCAGTAG ATTGGCTGAT GGGCGGCTGC AATTATTTTT TGTCACTGTG TCGCTTGGTG GGTGGGCAGG TAGTTCAATC TCGAGTGTCA TTTCAGAAGA TGAAGGTTTA TCTTGGGGTA AGCCACAACG ACTGATTAGT TCGCCATTGC TGAACTTGAG TACGCTCGTG AAGTCACCCG CATTGCAATT TACTGATGGT CGACTGGGAT TGCCTGCTTA TCATGAGTGG ATAGGACGCT TTGGCGAGTT CTTACGTATC GAAGGTGCGC AGGTAATTGA TAAGCGCAGA ATGAGCTCGG GGCGTAGCGC TATTCAGCCG GTAGTATTTG TAAATAGTGC TCAAGACGCA TCAGCTTATT TCCGTCAAAC CAGGAGTGCT GGCTTGGCTA AACATATTCC TGTGAGTCAG ACGCAGAATG CTGGCCAATC TTGGCAAGCC GCTGGCGATC TAGAGATCGC TAACCCCAAT TCTGCGGTTG CGGGATTGAC TTTATCTAAT GGCGCCCGTT TGTTGGCTCT CAATAATATT GAAACCGGTC GCCATCGTTT GGTGCTGATG ATGAGTGATC CCAAATCGGG TCAATGGCAT GTAGTCGATG TGCTGGAAAA TGATGAAGCA TTGCCTGATG ATCAACGTAA AGAATATTCC TATCCTTATT TATTAAGTGC TAACGGCAAT GATGCCCACT TGGTCTACAC CTGGGATCGA AAAAAAATAC GCCATGTCTA TTTATCTGCC CCATGGCTTG AAAATGCATT TAATCAATTG CCTCGCCAGT CTGTAAGCGA GTCTAGTGCT GCTGGTCAGG AGGTGCAACA ATGA
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Protein sequence | MSRVIALCFL LLAAVIGFLH LDSRPVWAPF IDTETIVTEI EAESPLITKV KGSNKSDPIA SKPQFNWLPD TGTSSVHAAS LIALKDGGIR AFWFAGSREG APDVVINTSA LDKSGKWSAP AVVMDRVTAE KGLGRYIAKL GNPVPSRLAD GRLQLFFVTV SLGGWAGSSI SSVISEDEGL SWGKPQRLIS SPLLNLSTLV KSPALQFTDG RLGLPAYHEW IGRFGEFLRI EGAQVIDKRR MSSGRSAIQP VVFVNSAQDA SAYFRQTRSA GLAKHIPVSQ TQNAGQSWQA AGDLEIANPN SAVAGLTLSN GARLLALNNI ETGRHRLVLM MSDPKSGQWH VVDVLENDEA LPDDQRKEYS YPYLLSANGN DAHLVYTWDR KKIRHVYLSA PWLENAFNQL PRQSVSESSA AGQEVQQ
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