| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1240 |
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| Symbol | |
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| ID | 5052520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1304359 |
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| End bp | 1305312 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640471412 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_001156019 |
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| Protein GI | 145589422 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.04127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTATC AACACCTTAG CCAAACTGAA CGATATCAGA TTTATATCCT CATGAAAGAC
GGAAAAACCC AAACTCAAAT AGCCCAACTG ATGGATCGGC ATAAGTCGAC CATTAGCCGA
GAGCTTGCTC GCAATACGGG GCTCAAAGGT TACCGTCCCA AGCAAGCCTG CCTGTTGGCA
GAAGAACGCT CATTAGGCTG CCGTAATGCC GCCCAAATAA CAGCCGATCA ATGGAATCAG
ACAGTGGATT GCCTCTTAGC TCAGTGGAGC CCCGTCCAAA TTGCCAATCA GGTTGGCATT
AGTCATGAGA CCATCTACCG CCATGTCTAC GCCGATAAAG CCGCTGGCGG CAATCTTTAC
CAGCAGCTGC GTTGCCAAAA AAAGCGCAAG AAACGCTATG CCAGCGGCCG TGATCGCAGA
GGCCAAATAG TAGGTAGGCG GCCGATCAGT GAGCGCCCAG CGCACATTGA GACAAGATCC
CAAGTCGGCC ACTGGGAAGG CGATACTGTA ATTGGAGCGG CCCACAGGCA AGCTGTTGTG
ACCTTGGTTG AGCGCAAGAG TGGCTATGTC GTTTTGGCTA AGGTCAAGAA CAAGACGTCG
GATTTAGTCA GTAGCGCCAT CATCACTAAA TTAAACGCCG TGACCCCACT CGTTAAAACC
CTGACTTTTG ACAACGGCAA GGAATTTGCC GAGCACGCCA GGATTGATAC AGCTCTTCAA
TCAACGACGT ACTTTGCGGA TCCGTTTGCT AGTTGGCAAC GTGGATCAAA TGAAAACTTC
AATGGTCTAT TGCGGCAATA CATCCCCAAA AAGAGACCGC TATCTACTGT GACCGATAAG
GAGCTTAGAA TGATCCAAGA CCGTTTAAAC AACCGACCTA GAAAACGATT AGGATTTAAA
ACCCCCAATG AAGTATTTAT GCAGTCCTTA AACCGTGTTG CACTTCGTGT TTGA
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| Protein sequence | MTYQHLSQTE RYQIYILMKD GKTQTQIAQL MDRHKSTISR ELARNTGLKG YRPKQACLLA
EERSLGCRNA AQITADQWNQ TVDCLLAQWS PVQIANQVGI SHETIYRHVY ADKAAGGNLY
QQLRCQKKRK KRYASGRDRR GQIVGRRPIS ERPAHIETRS QVGHWEGDTV IGAAHRQAVV
TLVERKSGYV VLAKVKNKTS DLVSSAIITK LNAVTPLVKT LTFDNGKEFA EHARIDTALQ
STTYFADPFA SWQRGSNENF NGLLRQYIPK KRPLSTVTDK ELRMIQDRLN NRPRKRLGFK
TPNEVFMQSL NRVALRV
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