| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1170 |
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| Symbol | |
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| ID | 5054019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1224887 |
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| End bp | 1228702 |
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| Gene Length | 3816 bp |
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| Protein Length | 1271 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471342 |
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| Product | cellulose synthase domain-containing protein |
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| Protein accession | YP_001155950 |
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| Protein GI | 145589353 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.456707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAACCTA TAGCCAAACT ATCTCGCTTT AGTCTTGCCT TGCTGATTTG CTTGTGGGCT
GGTAGTGCTT TGGCTGCTGA CGATGGTTTG AGTAGGCAAG AGAATATGGA GGCCCGTCGC
ACACTGACAC AGGCAACCAT CCTTCTCAAA AGTGGAAAAC CAGCCGAGGC TCATGCACTC
CTAAAAGAGA AGTTTCCTAA AGGACCGCCT GATGGGGATT TGGCTGTGGG GTATTACCGA
ATTATTGCTA GTACTCCTGG GGGTTGGGAT GAGGCTCGTG CAGGCTTAGA GGTGCTTGTT
AAGTCCGATC GGAAGAATGT GCAATACGCC TTGGCCTTGG ATGCATTGCT AGGCTCGAAA
AAAGCAACCC GTGACGAGGC GTTTAGTAAC CTTGCCGCTC TATATAACGT ACGCAAAGTA
GATAAGCAGC GTGTGCTTCA AGTTTGGCGG GAGGCGCTCA ATGCCCAAGA GCCTGGAACC
GACCTTATTC CTTATTATGA AGATTACTTA AGGATTGATC CCCACAATCA AGAAATTACA
GGGCGTTGGC AAGCAGAAAA AGAAGTTTTA CTGGAACGCA ATCGAATTGC TAATGATCCC
TTGTTACGCC GTCGCCAAGT GGGATTAGAT CTTCTGGATA AAGGCGATAT TGCAGCAGCA
GAGCAGCCTT TGCAGGACAC GCTTAAAGCG CTACCAAATG ATTATCTTGC CTTGGGCGGC
ATGGGCGTAA TTCGGATGCG GCAAGGTCGC TACGAAGAAG CTATTACATA CTATCAAAAA
GCATTGACGC TGAATCCCGA AAATAGCGGT AAGTGGAAAA GTTTGATCTC TACCAGTCAA
TATTGGATGC AGATACATCA AGCTGAAGAG GCTCGAGATA AAAAGAACTT TCCGCTAGCA
CTTGAAAAGA TTCGGGCAGC GATTGCTCTT GAGCCTCAGG GTGCCGAGGC GATTGCAGTC
CTAGGAACCA TTGAGGATGA TCGGGGTAAT TCTCGCGAAG CAGAGAAGCA ATTTCGTGAA
GCGTTGAACA TCGAGGCGGA CAACGGCATT GCTATTCGGG GCCTAGTGCA ACTATTAATT
GATAGCGGCA AACAAAAAGA AGCTTTAGCC CTGATTAATG CTCAAGCACC TCAAAATAGT
CCTGAAGGTA AGCGTTACGA CTACCTACGG GTCAAAATAT TGAGCGCGCA AGCCGATGAC
TTCATTGCTA AAGGCCAGCG TGATGAAGCA ATTGCATATC TTCTGCAGTC ATTGAAGCTT
GAGCCACTAA ATCCTTGGCT ACGGTTTAAG TTAGCAGGTG AATATGAGGA TGGGGGTTTG
CAAGATAAGG GTCTTAGCTT GATGAAGGAG GGTCTCAGGC TGGCCCCTAA TGATTCAGAG
ATGATTAACG CAAACGTCCT TTACTTACTC AGTATTGATC AGTCTGAAGA GGCATTGCTA
TTGCTGAAAG CGAGTTTGGC AAAACCCGCC CTGGCAAATG CCTCATTACG TTTAACTTAT
GCGGATGTCT TAAATCGACT AGAAAGAGAT GATGAGCTCA AACCAGTCTT GGAACAACTT
CGCAAAGCAC CCCTGACTGG TGAAGAGAAG GGTAAATATG CTCGTATCGA TCTCGATTAT
GAAATTCGAC AGGCTTTAAA AGCGGGTGAT ACCAATACAG CCATTGCTTT ATTAAATAAG
GCTGTAGAGC TTGAGCCAGA CGACGTATGG TTACGACTCG ATTTAGCGCG CCTGTACGCC
AAAATAAATC ACCCTAAAGA TGGAATTGCG TTGTTTGATC AGTTTGTCAA AAAACATCCC
AATAATGTTG AGGGTTTATA TGCCTATTCA CTGTATTTGT CGGGTTTAGA TCAAAATCAG
GCTGCCTTGA AAGTCCTAGA ACAGATTCCT TTGGCCGATA GAACGCCCAA AATCAGCCGC
TTTCAAAGAA GTGTTTGGCT AGATCTGCAA TTGGCTCAGG TAAATATACT CAATGCCCAA
GGTAAGCAGG ATGAGGCAGC TGCTCGCCTC ACCTCACTTG AGGCCGAGGT ATCCAATGAC
CCGGATCTCT CTGCATCAGT AGGAACATCT TGGGCGTCGA TTGGTAAGCG TGAACAAGGC
GATGCTCTTT TTGCAAAAAT TCAGGAGCAA AACAAAATAC TTTCTATAAA TTGGCATTTA
CGTTATGCCA ATTACTTATT CAACAATGAT GAAGGTGATG CCTTTAAAAA ACAGATGCAG
TATCTTGCTA GTCAAAAATT AAACCCTGGA CAGATACAAG ATTTTGCAGA TTTAAAGCAG
GCCTCCGAGC TACAAGATAT CAATGTGATG ATTCGTTCTG GCGATATTAA AGAAGCCAAT
CAGCTTTTGC AGCCTTTGAT GACGTCTTCC CCGAATAATT ACAAAATGAT GTATCTCGAT
AGCCAGATAC AAAGAAGGGA AGGTTATCTA GATAAGGCAA TTGATATTGA GCAGCGCGCT
TTAGCCTTAT CGCCAGTGCC TCTTTCTAAT TACCGGAGCC TATCGACACT CAAGCCAACT
AACTCTTCTG CGCAATCGCT GACTATGAAT AGCAATGCGA ATACCACCAC AAACTTAAAA
GAGGGTGTTT CGGTATTTCA CATTGAGCCA CCAGTGTTGG AGCCCTCGGC AGTCGCATCT
GGCAGCGCTT ATCAATATAA GCAAATGGCG GACATGCTGG ATTTGCGGAC CAATTGGATT
GATGGAGCAG TTGACTATCT TTCGTTGAAC GGAACGCCTG GTCAGTCCCA ATACAGGGCC
AGCGAGATTC CTTTGGAATG GAGGATGCCA TTGCGCTCTG ATGAAAGAAT GACCTTCCGC
GCTGATCAAG TCAACATTAA TGCTGGAACC ATTGCTGCAG GCAATACTAC TTTTGGCACA
TTAGCGGCTT GTGGAGCTAG CTGCCCTACC TCATTCTCCA ATCAATCTGC CTCAGGTACA
GCACTTAACG TAGGTTATGA GAAGCAAAAC TTTAAGGCTG ACATAGGCAC AACGCCGCTT
GGATTCTTGA CGCAAAACTG GATCGGCGGA ATAAAGCAAA AAGGCGATTT TGGACCCTTA
GGTGTTTCAT TAGAGCTATC GCGACGGCCC ATGACGAGCA CGATGCTCTC TTATGCAGGA
GCGCGTGATC CTGTCACCGG AAATATCTGG GGCGGAATGG TCGCTACTGG CGGAACTCTT
AGTATGAGTT TGGATCAAGG TGAAACGCTT GGGGGCTGGG CTTTCTATAG AGCACGTAGC
CTTACCGGAA CCAATGTGCA AAGTAATAGT GACAACCAAT TTATGGCTGG ACTTAACTGG
CGCATCATCA ATGAAACGGA TCGCCAACTT ACAAGTGGTC TTACTGGAAT GCTGTGGGGC
TTCAAGCAAA ATTCGGGAGA GTTTACTTAT GGGCAGGGTG GTTATTACAG CCCACAGAGT
TACCGCTCAG CAACTTTACC CTTGAGTTGG TCCCAACGTT TTGCACGCCT CTCTTATGTC
TTGAGCGGGT CGGTATCCAC CAATTGGTCT CGCACAGATG CAGCGCCATA TTTTCCGACT
AATCAAGCTT ATCAAAATGC TGCAAATGCT AACAATGGAG GAGTGCCTCA GTATTACTCC
GCCAGTTCTG GCCCAGGTAG CGCCTATTCT CTCTTAGCTG CTTGGGAGTA TCAACTTACC
CCATCTGTAT TTGTAGGTAA CCGCCTGAAG TTGGAACGCT CGCCTTACTA TGCGCCTAAT
AGCTTTGTCT TGTATGTTCG TATTGCTCTC GATGAGACCG CACCCCACCC AGTGCCTTTA
CAGACTCAAC CTGTTATTCC AACGTCGCAT TTTTGA
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| Protein sequence | MKPIAKLSRF SLALLICLWA GSALAADDGL SRQENMEARR TLTQATILLK SGKPAEAHAL
LKEKFPKGPP DGDLAVGYYR IIASTPGGWD EARAGLEVLV KSDRKNVQYA LALDALLGSK
KATRDEAFSN LAALYNVRKV DKQRVLQVWR EALNAQEPGT DLIPYYEDYL RIDPHNQEIT
GRWQAEKEVL LERNRIANDP LLRRRQVGLD LLDKGDIAAA EQPLQDTLKA LPNDYLALGG
MGVIRMRQGR YEEAITYYQK ALTLNPENSG KWKSLISTSQ YWMQIHQAEE ARDKKNFPLA
LEKIRAAIAL EPQGAEAIAV LGTIEDDRGN SREAEKQFRE ALNIEADNGI AIRGLVQLLI
DSGKQKEALA LINAQAPQNS PEGKRYDYLR VKILSAQADD FIAKGQRDEA IAYLLQSLKL
EPLNPWLRFK LAGEYEDGGL QDKGLSLMKE GLRLAPNDSE MINANVLYLL SIDQSEEALL
LLKASLAKPA LANASLRLTY ADVLNRLERD DELKPVLEQL RKAPLTGEEK GKYARIDLDY
EIRQALKAGD TNTAIALLNK AVELEPDDVW LRLDLARLYA KINHPKDGIA LFDQFVKKHP
NNVEGLYAYS LYLSGLDQNQ AALKVLEQIP LADRTPKISR FQRSVWLDLQ LAQVNILNAQ
GKQDEAAARL TSLEAEVSND PDLSASVGTS WASIGKREQG DALFAKIQEQ NKILSINWHL
RYANYLFNND EGDAFKKQMQ YLASQKLNPG QIQDFADLKQ ASELQDINVM IRSGDIKEAN
QLLQPLMTSS PNNYKMMYLD SQIQRREGYL DKAIDIEQRA LALSPVPLSN YRSLSTLKPT
NSSAQSLTMN SNANTTTNLK EGVSVFHIEP PVLEPSAVAS GSAYQYKQMA DMLDLRTNWI
DGAVDYLSLN GTPGQSQYRA SEIPLEWRMP LRSDERMTFR ADQVNINAGT IAAGNTTFGT
LAACGASCPT SFSNQSASGT ALNVGYEKQN FKADIGTTPL GFLTQNWIGG IKQKGDFGPL
GVSLELSRRP MTSTMLSYAG ARDPVTGNIW GGMVATGGTL SMSLDQGETL GGWAFYRARS
LTGTNVQSNS DNQFMAGLNW RIINETDRQL TSGLTGMLWG FKQNSGEFTY GQGGYYSPQS
YRSATLPLSW SQRFARLSYV LSGSVSTNWS RTDAAPYFPT NQAYQNAANA NNGGVPQYYS
ASSGPGSAYS LLAAWEYQLT PSVFVGNRLK LERSPYYAPN SFVLYVRIAL DETAPHPVPL
QTQPVIPTSH F
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