| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1141 |
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| Symbol | |
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| ID | 5052636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1191579 |
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| End bp | 1192283 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640471312 |
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| Product | TonB family protein |
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| Protein accession | YP_001155921 |
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| Protein GI | 145589324 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTACCT TCTTGCAAAA ACTGGACTCA CATCTCCCGT TCAATAAAAC CGAGCGCATC
ATTATTGCCA TCGTACTTTT ATTACACGCA CTGCCTGCAC TTGAATTTTT GCACTGGAGC
GCACCCAAGC CGCAGTTAGA CGATACGCGA GTGATGGCCA ATTTAGTGAG TCCGGATACT
GCCGGAGCTA AAGCAGAACA AGCTCCTGCA GCCCCGCCAC CAAAACCCAA AGAAGAGCCG
AAAAAGAAAA AAGCGGAAGA AAAGCCGAGC CAGAAACCAA CCCCTAAACA AGCATCTGAG
GCGCCTACGC CTCCAAGCCC ACAGCAAAGC AAGAGCGATG CATCTTCATC GCAAAGCCAG
ATGCAAAATG CCTCGGTAGC CCCTGCAACT AGCGGTGGTG CAAGCGGGAC GCCTATTCAG
ACTGACATTG GTAAACTGGT AGTGGTGTAT CAACCAGATG CCGATGCCTA CTACCCTTCA
TTCTCTAAAC GCTCAGGCGA GCAAGGTGCA GTGGTAGTTC GGTTGATCAT TGATGAAAGC
GGTAGTGTTG AGGATGTTGC TCTATTGCAA TCAAGCACCT TCCCTAGGCT GGATCGTGCA
GCAACCGATA TTGGTAAACG TTATCGCTTT AAACCTTTTT TAGTCAATGG CGCACCACAA
AAAATTTCTA CCAACCTTTT AATTAAATTT AATCTGAAGA ATTAA
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| Protein sequence | MSTFLQKLDS HLPFNKTERI IIAIVLLLHA LPALEFLHWS APKPQLDDTR VMANLVSPDT
AGAKAEQAPA APPPKPKEEP KKKKAEEKPS QKPTPKQASE APTPPSPQQS KSDASSSQSQ
MQNASVAPAT SGGASGTPIQ TDIGKLVVVY QPDADAYYPS FSKRSGEQGA VVVRLIIDES
GSVEDVALLQ SSTFPRLDRA ATDIGKRYRF KPFLVNGAPQ KISTNLLIKF NLKN
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