Gene Pnuc_1113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1113 
Symbol 
ID5051932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1159389 
End bp1159736 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content42% 
IMG OID640471283 
Producthypothetical protein 
Protein accessionYP_001155893 
Protein GI145589296 
COG category[K] Transcription 
COG ID[COG4190] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.341492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTCA TCAAAATTGG AATCGCATCT CAAGAGGAGA TTCGCAAGCG GATGCTTGCA 
ATTGCCAAAG GGGAATTAAA AATAAAGTCT AGTGATCCAA AGATATGGTT TACTTCAATG 
CGCTCTTTAT CTGCGGTTTT AAGTGATGAA AATCGCGCTT TATTGGATGT GATTAGATCT 
TCAAAGCCGG TATCCATTTC TGAATTGGCG GAATTGACTG GGCGTAAGCA GGGCAACTTA 
TCAAGAACCC TCAAGACTAT GTCTAATTAT GGGTTGGTCA GAATGGAAAA GCAGGAGAGG 
GCATTAATGC CTATCGCCTG CGGTGATCGC TTTGAGATTT TTGTGTAA
 
Protein sequence
MKVIKIGIAS QEEIRKRMLA IAKGELKIKS SDPKIWFTSM RSLSAVLSDE NRALLDVIRS 
SKPVSISELA ELTGRKQGNL SRTLKTMSNY GLVRMEKQER ALMPIACGDR FEIFV