| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1096 |
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| Symbol | |
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| ID | 5051991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1134373 |
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| End bp | 1139667 |
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| Gene Length | 5295 bp |
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| Protein Length | 1764 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640471266 |
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| Product | sulfotransferase |
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| Protein accession | YP_001155876 |
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| Protein GI | 145589279 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF
[COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCACTA AAGATAAACC CAAGCGCGAG ACTACTCGCA AGTCGATCTC TACAAAAGGG
CCTGCGCATT TACCCAAGGG TAACTATTCA GTAATACCCG ATCCTAGCAA GAAAGTCGTC
AAGAATGAGT ATGCCGCTGA AATGCAGGCC GCTGCTCAAC TCGAAGTTGC GGGAAGACTT
CAGGAGGCTG AAAGCATCTA TCAGCAGATA GTCAATCTGA AGCCTGATTT TGCGCCTGCA
TGGCATAGCC TCGGAATGTT GGCGTATTCA GTTGGTAAGC ACGAGTTAGC ACTCCAACTA
GTTAGCAAAG CGGTTGATCT TGATAAAAAA TCATTTTTAT TTCAACGCAA TTTTGGGGAG
ATGTCTCGCA GGTTTGGAAG GCTTTCTGAA TCAATTGCTG CGGGTGAAGC TACTGTAAAG
TTGGCTCCAT TAGACGTAGA TGCTCACTTT AATTTGGGCT TGGCTTATAC GGATGCGAAG
GACTATACCA AGGCTGTTGC AGCCTACAAA AAAGCGCTGA AATTAAATCC TAAGCATGGT
TTGTCGTGGA ATAACCTAGG CTCTGCATTA GAGCAGAGCG GGAATAAAGA TGAAGCATTA
GAGGCTTATA TCAAGGCTGC GGAATTAAAT CCCCAACATT CTGAGGCGCA AAATAATCTA
GGTGCTATTT ATAGCGAGCA GGGCCTTTTA GAAAAAGCCA GAACAGGTTT TGAGGCGGCC
ATTGATGCCA AGAAAGATTT TGTCGAGGCA CATTACAACC TCTCACAAAT TAAAACCTAT
ACCCTAGATG ACCCGCATTT ATCCATCTTG GAAAATGCCA ACCAAATTCA ACATCAATTT
AACGATCATG TTCGTATTCG GTATAACTTT GCACTGGGTA AGGCTTTAGA TGATATCGGG
CAATATGACC GTGCTTTTGC GGCCTATGCC TTAGGCAATC AATTGCAACA CGCTTTACTC
CCTGTAGATG AAATTAGGGC GGATCAGTTA ATTGAAGAAA TTTTTCGCAC TTTTAACTCC
TCTTTTTTTG AAGAGCGTAA AGGCTGGAGT AAAAACTCAA GTTCTCCTAT TTTCATCGTA
GGTATGCCTC GCTCTGGCAC TACATTATTA GAGCAAATCT TGGCTAGCCA TCCTTCGGTA
TATGGCGCAG GGGAATTAAG TGATTTCAAT GATTTGGTTA CAGAGCTTGT AACTGAGAAT
GGCAAGGATT CTTTTGCCAA TCGCGTAGTT CATCTGGATA AGAAAAGCCT ACAAAAAATT
GGCGATGAAT ATGTAAAGCG CGTGTGGAAG CTTTCCCCTG ATAGCACTTA TATTACCGAT
AAAATGCCGG CCAATTTTTT CTATATTGGC CTCATTCACC TCATCTTTCC GAACGCCAAA
ATTATTAATG CAATGCGTGA TCCGATGGAT TCATGTTTTT CTTGTTATTC GCGTTTATTC
AATGATTCGA TGGATTTTGC CTATGACCTG GGGGCTCTAG GGCGTTATTT CGTTCGGTAT
ATGCGCTTGA TGCAACACTG GGAGTCTGTA TTACCACCCG GTACTATTTT GAATTTGGCT
TATGAAGACT TGATAGCTGA TACTGAGGGT CAAGCCAAGC GAATTACTGA ATATATTGGC
TTGCCTTGGG ACGCAGAGTG CCTTAAGTTT TATGAGAATG ACAGACTAGT TAAGACGGCT
AGCATTGCTC AAGTTCGCAA GCCAATTTAT AAAACCTCTC TGGCCCGATG GAAGCATTTT
GCCCGCCATC TATTGCCTTT GTATGAAATA GTTAAAGATT ACAGATCGGC AAAAGCGCCC
GAGTTTCCAA AAGAGGCTTT GGCTCAAATA GTATCCACTA AACAAGCGCT TGCTGTGGAT
CAATTTATTC AACGATGCCT GCAGTTACAA AATCAAAATA ATCACAGCGA AGCTTTGGCA
TTGCTAGAAG ATGCAGTGCG GCGTGGTGAG CAATCCCCGC AAATTTGGCA CTTACTAGGA
ATTTCGTTAT ATCGCCTAAA TCGCTTCCAA GACTCTCAGT CTAGTTATGA ACGTGCATTA
CAGTTGGAGC CCAATTTCCC TGCAGCGCTC AATAGTTATG GATTCCTATT GCAGGACATG
GGCTATGTGC AAGAGGCTAA AAATGCCTTT GAGAAAGCTG TTCAAATTGC GCCTGAATTT
TCTATGGCTA GATTGAATTT GGGTATGGCT CAATTAAAGC TGGGCGACTG GGAAGCAGGC
TGGGATAACT ATGAGTCCAG GTGGACTGGT TCGGCGGAAA CCGTAAATGC GAACTTTAAA
AAACCAGAAT GCCCTTTGCC GCAGTGGGAT GGGCAAGCGG GCACTGAAAA TCAAAATCTT
CTTATCATTA CTGAACAAGG TTTTGGAGAT ATATTCCAGT TCGCACGCTT TTTAAAGTTA
GCTACTCAGA AATTTACAAA AGTGGGTTTT ATTTCTTCCT CACCAAGTTT GAGAATTCTA
GAGTGGTCCT TTGGCGATAA AGTCGTGCTC TTAAATCGCA TGCCAGCCGA TTACTCTACG
TGGCATTGGT ATATCCCTTT GATGTCTTTA CCGCGTGCAT TAAAGACGCG TTTGGATAAT
TTACCCGTTG ATGTGCCTTA CTTGGGTGTT TCTCAAGCGG CTAAAAATCA CTGGCGAGAT
CGTTTGGAAC ATGATGCCCC AGGGCGCTTT AGGGTCGGAA TTGCATGGGC TGGACGAAAG
ACCCACCAAT ACGATGGAAG AAGAAGTATT CAATTACAAA AGTTGTTGCC TGTGTTGCAA
GGTGAGAACA TCACTTGGGT GAGTTTACAA AAATGGGCCC CCGAAGAAGG GCGACCACAA
CTTCCCGACT CAATTGATTG GATTGACTGG ACCGAAGAAT TAACTGATTT TGCAGATACA
GCTGCATTGA TTAGTAATTT AGATTTGATC ATCTCGGTAG ATTCATCTAT GGTGCATTTG
GCCGGTGCTT TAGGTAAGCC GGTCTGGATG CTCAATCGTT TTGATTCAGA GTGGCGTTGG
TTAATTAAGC GTTCGGATAG CCCATGGTAT CCAAATTTGC GGATATTTAA TCAACCCCAA
TTCGGCAATT GGGATCCCGT GCTTATGGAG TTAAAGCAAT CCTTGCAGCA GTTAAATGTA
CCTCAGGTGC CAGCCAAAAA ACGGATTGCG AATACGCAAA ATGCGGCCTT GGTAAAAACT
TCCAACGCTC CCATGCAATC TCCGTTGACC ATTGATCAGG CAATGCAAGT GGCTGGTCAA
CTGCAAGGTG CCGGTCGAAT TCATGAGGCT GAGCAAGTAC TGCGCCAAGT TTTGGCTATA
AACCCAAAAC ATGCACATGC CCTTCATTTA TTGGGCGTGG TTTCCCACCA GCAGGGCAGG
GGACCGCTAG CCTGTCAGTT GATTAAAGAT GCGATTGCTA TTGAACCTAA GGTCGCGCTT
TTTCACTGCA ACTTAACTGA GATGAGTCGT CAGATGGGTC GCCATCAGGA TGCCATTTAT
CACGGTGAGC AAGCAATTCA ATTAGACCCC TCTATGGCTA TGGGCTATAG CAATCTGGGT
ATTGCCTTCT ATGACAATAA AGAATTTGTA AAAGCAAAAT CTTGCCACGA GCGTGCTTTG
GCATTGGCAC CCAATATGTT GCAATCCCTC AATAATATGG GAAGCATTGC GCGCGCTGAG
AAAGATAAAA ATAGTGCGAT TGAATGGTAT CAGCGTGTTA TATCCATTGC TCCCGACTAT
TTAGAGTCGC TTAGTAATTT AGGCGCTGTA TTGGTTGAGC TTGATCGTGC TGATGAGGCA
ATTCCTATTT TGCAAAAAGC ACTTAGCTTG AATGAGAGTT ATCCAGAAGC ACTCTGTAAT
CTTGGTTTAG CAAGATTAAA ACGAGATGAG ATCGACATTG CGGGTAGGTT ACTAGAGCGC
TGCCTACAGC TTCGGCCCGG TTACCCGGAG GGGTTAACAG GCTTGGCGCG TATTTTTAAT
GAGCAGGATC GCTTACCTGA GGCTGAGCAG CTGCTTTTGA CTGCCCTAAA AAATGCCCCT
GATAAGGTGG ATGCTCGCTG CCAATTGGCA GCAATCTATA CAGAGCTTGG CAAAGCTAGT
GCTGCAGAAG CGCTTTACCA AGAGGCTTTA GTTATTGAGC CTGATTCAGC CGATGCATTT
ACTGGCCTTG GCAATTTAAG TTTAGAGGCC GGCAATATAG AGCTTGCAGA AGAGTATCTT
AATAATGCTA TCCAACTTCA GCCCGACAAT CTAGACGCTC GTTTTCATTT AACGCAAATT
AAAAAAGTAG AGGCGGGAAG CGCTAATTTA ATTGCATTGG AGAATGCATT AACGGGCAAC
CAACGATTAA CGAATGACCG ACGAATTTCT TTGCATTACG CATTGGGAAA AGCTTACGAC
GATTTACATG AATACGATAG GGCCTTTGAG AATTTTTCAA TAGGCGCTAA ACTGAAGCGG
GCAAAGTTGC ATTACAGCGC TGCTGAAGAA GGTGCTTACA TAGACCAAAT TATTGCTACG
TTCACACCGG AGTACTTTAA GGCACATCAG GGAGGTGGAT CAACATCCCC CTTGCCTATA
TTTGTATTGG GTATGCCACG GTCTGGCACC ACATTAACTG AGCAAATTCT AGCAAGCCAC
CCCGAGGTCT TTGGGGCGGG TGAGATCAGC GATTTAATTG AATCTATTGA GACTGCGGAT
CGAAGTAATT CAGCCAATTT ATACCCGAAT AGTCTTCGCG ATTTAGGTGG AGATAAGCTT
ACTCAATGGG GTAAAAATTA CATTGCACGA TTAAATGCAT ATGCCCCAAA TGCATTGCAT
ATTACCGATA AGATGCCAAG CAACTATATG CTATTGGGAT TGATTCCGCT CATGTTGCCT
AATGCAAAAA TCATCCATGT CAAACGCAAT CCAATAGATA CCTGCTTATC TTGTTTTACT
AGATTGTTTA ATCGACATCA GTCGGCTACC TATGACTTGC ATGAACTGGC TGAACACTAC
AAAAACTATA TGCGCCTCAT GAATCATTGG AGAAAAGTTC TTCCAGAAGG AAGTTTTCTG
GAAGTTCAGT ACGAAGACAT TGTGGCTGAT ATTGAAGCCG AAGCTCGTCG CTTAGTGGAA
TATTGTCAGC TTGAATGGGA CGACTCTTGC TTGGAGTTTT ACAACAATAA ACGTCAAGTA
AGAACAGCTA GCGTTGCCCA GGTGCGTAAG CCAATCTATA AGCAGTCAGT AGAGCGTTGG
CGTAACTATG AAAAGCATCT CACCCCATTA TTGGATGCAT TGGGCAAAGA ACCCGGGAAT
ATCCCGGTGA AATAG
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| Protein sequence | MATKDKPKRE TTRKSISTKG PAHLPKGNYS VIPDPSKKVV KNEYAAEMQA AAQLEVAGRL
QEAESIYQQI VNLKPDFAPA WHSLGMLAYS VGKHELALQL VSKAVDLDKK SFLFQRNFGE
MSRRFGRLSE SIAAGEATVK LAPLDVDAHF NLGLAYTDAK DYTKAVAAYK KALKLNPKHG
LSWNNLGSAL EQSGNKDEAL EAYIKAAELN PQHSEAQNNL GAIYSEQGLL EKARTGFEAA
IDAKKDFVEA HYNLSQIKTY TLDDPHLSIL ENANQIQHQF NDHVRIRYNF ALGKALDDIG
QYDRAFAAYA LGNQLQHALL PVDEIRADQL IEEIFRTFNS SFFEERKGWS KNSSSPIFIV
GMPRSGTTLL EQILASHPSV YGAGELSDFN DLVTELVTEN GKDSFANRVV HLDKKSLQKI
GDEYVKRVWK LSPDSTYITD KMPANFFYIG LIHLIFPNAK IINAMRDPMD SCFSCYSRLF
NDSMDFAYDL GALGRYFVRY MRLMQHWESV LPPGTILNLA YEDLIADTEG QAKRITEYIG
LPWDAECLKF YENDRLVKTA SIAQVRKPIY KTSLARWKHF ARHLLPLYEI VKDYRSAKAP
EFPKEALAQI VSTKQALAVD QFIQRCLQLQ NQNNHSEALA LLEDAVRRGE QSPQIWHLLG
ISLYRLNRFQ DSQSSYERAL QLEPNFPAAL NSYGFLLQDM GYVQEAKNAF EKAVQIAPEF
SMARLNLGMA QLKLGDWEAG WDNYESRWTG SAETVNANFK KPECPLPQWD GQAGTENQNL
LIITEQGFGD IFQFARFLKL ATQKFTKVGF ISSSPSLRIL EWSFGDKVVL LNRMPADYST
WHWYIPLMSL PRALKTRLDN LPVDVPYLGV SQAAKNHWRD RLEHDAPGRF RVGIAWAGRK
THQYDGRRSI QLQKLLPVLQ GENITWVSLQ KWAPEEGRPQ LPDSIDWIDW TEELTDFADT
AALISNLDLI ISVDSSMVHL AGALGKPVWM LNRFDSEWRW LIKRSDSPWY PNLRIFNQPQ
FGNWDPVLME LKQSLQQLNV PQVPAKKRIA NTQNAALVKT SNAPMQSPLT IDQAMQVAGQ
LQGAGRIHEA EQVLRQVLAI NPKHAHALHL LGVVSHQQGR GPLACQLIKD AIAIEPKVAL
FHCNLTEMSR QMGRHQDAIY HGEQAIQLDP SMAMGYSNLG IAFYDNKEFV KAKSCHERAL
ALAPNMLQSL NNMGSIARAE KDKNSAIEWY QRVISIAPDY LESLSNLGAV LVELDRADEA
IPILQKALSL NESYPEALCN LGLARLKRDE IDIAGRLLER CLQLRPGYPE GLTGLARIFN
EQDRLPEAEQ LLLTALKNAP DKVDARCQLA AIYTELGKAS AAEALYQEAL VIEPDSADAF
TGLGNLSLEA GNIELAEEYL NNAIQLQPDN LDARFHLTQI KKVEAGSANL IALENALTGN
QRLTNDRRIS LHYALGKAYD DLHEYDRAFE NFSIGAKLKR AKLHYSAAEE GAYIDQIIAT
FTPEYFKAHQ GGGSTSPLPI FVLGMPRSGT TLTEQILASH PEVFGAGEIS DLIESIETAD
RSNSANLYPN SLRDLGGDKL TQWGKNYIAR LNAYAPNALH ITDKMPSNYM LLGLIPLMLP
NAKIIHVKRN PIDTCLSCFT RLFNRHQSAT YDLHELAEHY KNYMRLMNHW RKVLPEGSFL
EVQYEDIVAD IEAEARRLVE YCQLEWDDSC LEFYNNKRQV RTASVAQVRK PIYKQSVERW
RNYEKHLTPL LDALGKEPGN IPVK
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