Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1074 |
Symbol | |
ID | 5053349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1077519 |
End bp | 1078700 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640471242 |
Product | hypothetical protein |
Protein accession | YP_001155854 |
Protein GI | 145589257 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTAATT CTGACACCAT TTCCACTAAT TCTGAGGCAT CAATTGCTGC CTGGGGCAAG GTGGATGACA CGCATGCAAA TGTCACGTTA AATGGTGTTG TAAATGTGTA TACGCTGGGT GGTGTATGGA CGCAAGTGCG TGCAGCCCAG GATGCATGGC TACATTCAAG CTCTACGGTT AATAGTGCTG CTAAATCCCT TACTTGTGAT GTCACCAAAG TCGAAACACT TGATGGTGCT GGAATCGCTT TCATCATTGC ATTGCAAGAA GCACAAACTG TCGCCGGTGG TAATTTCGAA TTGATAGGCT TAGCTGAGCG CTATCAGCCA CTGTTAAAAG AATTTGATCC CATCTCAAAT TTATTTCCAG CCCCTGTAGC GAAGCCACAA AGAGGTTTTG TGACCAATAT AGGAATGGGT ACTGCAAATT TAATAAAAGA TAGCAAAGGT TTAATTACCT TTCTAGGTCA TCTTGGCTCA GACCTTGTGT GGTCTGTTCG AAATTTAAAG CATGTTCGCT GGGGTGACTT TGTTAATGCA GCTGTAGAAG CTGGTATTAA TGCTTTGCCA ATTATTGGGT TGGTTGCCTT CTTAATTGGC GTAATTCTTT CATTTCAAGC TGCTATCGGG ATGAAGCAGT TTGGCGCCGT GTCATTTGTT GGCCCGCTAG CTGCACTCGG CATCGTACGT GAGATGGGGC CTTTGATTAC TGCTATTTTG CTAGCCGGCC GATCATCAGC AGCATTTGCT GCTGAGATTG GAACCATGAC CGTCAATAGC GAGGTTGATG CCTTGGTTTC GGGCGGCTTA AGTCCAATGC GATTCTTGGT GGTACCCCGT GTTCTGGCTG GTATTTTGGT TGCCCCGATC CTAACGTTAT TTGCCGACAT CGTCAGTATC TTTGCATCCA TGCTCACTAT GTTGATTTAT GGAATCCCTT TCATTAATTT TTATAACGGC ATGCTCTCCG CAGTCGATGT TGAAGATGTC ACGTCGGGAT TAATTAAGGC CACCTTATTT GGTGTAGTTG TTTCAGCGGT AGGCTGTCTG CGGGGTATGC AAACTGGAAA CGGGGCAGCA GCAGTTGGTA TTTCTGCAAC TCGTGCCGTG GTTAGCAGCA TCGTGATGAT CGTGATTGTT GACGGAATAT TCGCTTTCAT TTCTTATAAG ACGGGCTTCT AA
|
Protein sequence | MSNSDTISTN SEASIAAWGK VDDTHANVTL NGVVNVYTLG GVWTQVRAAQ DAWLHSSSTV NSAAKSLTCD VTKVETLDGA GIAFIIALQE AQTVAGGNFE LIGLAERYQP LLKEFDPISN LFPAPVAKPQ RGFVTNIGMG TANLIKDSKG LITFLGHLGS DLVWSVRNLK HVRWGDFVNA AVEAGINALP IIGLVAFLIG VILSFQAAIG MKQFGAVSFV GPLAALGIVR EMGPLITAIL LAGRSSAAFA AEIGTMTVNS EVDALVSGGL SPMRFLVVPR VLAGILVAPI LTLFADIVSI FASMLTMLIY GIPFINFYNG MLSAVDVEDV TSGLIKATLF GVVVSAVGCL RGMQTGNGAA AVGISATRAV VSSIVMIVIV DGIFAFISYK TGF
|
| |