Gene Pnuc_1049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1049 
Symbol 
ID5053954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1054282 
End bp1054881 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content44% 
IMG OID640471216 
ProductNADH (or F420H2) dehydrogenase, subunit C 
Protein accessionYP_001155829 
Protein GI145589232 
COG category[C] Energy production and conversion 
COG ID[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID[TIGR01961] NADH (or F420H2) dehydrogenase, subunit C 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGATC GTTTAGTTCA TTTAGCTGCT AATTTAGAAA AAGTTCTAGG TAAGCGCGTC 
CAGTCAATCG AGATTGCCCT AGGCGAAGTG ACTGTTGTTG TTAATGCAGA TACTTATTTT 
GAATCTGCCA TGCTCATGCG TGATGATCCT TCATTAGCGT TTGAGCAATT AATTGATTTG 
TGTGGCGTTG ACTACCAAGA TTTTCGCGAT GGCGCATGGA ATGGCCAGCG CTTTGGAGTG 
GTAAGTCATT TACTCTCACT TGAGCACAAC TGGCGCTTGC GTGTTCGTGT GTTTGCTCCA 
GATGATAGCT ATCCATTAGT CGCATCCATT ACTCCGGTTT GGAGTTCTGC TAATTGGTTT 
GAGCGCGAAG CATTCGATCT TTACGGCATT ATTTTTGAAG GCCATGAAGA CTTACGTCGC 
ATTTTGACTG ACTATGGTTT TATTGGTCAC CCATTCAGAA AAGATTTCCC AATTAGTGGC 
AATGTTGAAA TGCGCTATGA CCCTGAGTTA AAGCGTGTGG TCTATCAGCC TGTCACCATT 
GAGGCTCGTG AGATTACTCC TCGTATCGTT CGCGAAGAGC AGTACGGAGA TCCGGTTTAA
 
Protein sequence
MSDRLVHLAA NLEKVLGKRV QSIEIALGEV TVVVNADTYF ESAMLMRDDP SLAFEQLIDL 
CGVDYQDFRD GAWNGQRFGV VSHLLSLEHN WRLRVRVFAP DDSYPLVASI TPVWSSANWF 
EREAFDLYGI IFEGHEDLRR ILTDYGFIGH PFRKDFPISG NVEMRYDPEL KRVVYQPVTI 
EAREITPRIV REEQYGDPV