Gene Pnuc_1034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1034 
Symbol 
ID5052852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1037087 
End bp1038208 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content49% 
IMG OID640471201 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001155814 
Protein GI145589217 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTGC TTTTTTCACC TTACACCCTA AATTCTCCCC GTGGCCCGTT GGAGCTCCCC 
AATAGGATTG TTATTGCGCC GATGTGCCAA TATTCGGCCA CCAATGGGGA GGCGACAGAC
TGGCATTTAA TGCATTGGGG AAACCTATTA AATGGTGGGG CAGCACTTAT GATTATCGAA
GCCACTGGAG TTACCCCTGA GGCTCGTATA ACCCCCGCGT GTCTCGGCTT GTGGGATGAC
CGAACGGAAG CAGCTTTAAA AGATAAATTA ACCCGTGCCC GTGCTTTGGC GCCAGCTACC
CCAGTATTTA TTCAGCTGGC ACATGCAGGT CGCAAGGCCT CAAGTGCTAC CCCTTGGGAT
GGTGGGCAGC TATTGCCAGC CGATAAAGGA GGCTGGGAAA CCATGGCGCC GTCAGCAATT
CCACAGTTAG AGGGTGAGCG TCTTCCGCAT GAACTTTCTA AGTCAGAGCT TAAAGAATTA
GTAGATGCCT TCGTAATCGC AGCTAAACGC GCTGATCGTA TTGGACTAGA TGGTATTGAA
TTGCATGGTG CCCATGGCTA CTTATTACAT CAATTTTTAT CGCCGATTGC CAATCAACGT
AACGACGAAT ACGGCGGTTC TTTTGAAAAT CGCATTCGTT TTCCATTGGA ATTATTTGCA
GCAGTCAGGG CAGCTTATCA GGGCGTATTA GGCATCCGAA TTTCCGCAAG CGATTGGGTA
GAGGGTGGCT GGACTCCTCA GGAGACCGCT GAATTTGCTA AGCAACTTAA ACCTTTGGGT
TGTGACTTTG TGCATATTTC TTCCGGCGGG GTTTCGCCAA ATCAAAAGAT TGCTTTGGGT
CCTAACTACC AAGTACCTTT TGCGAAAATG GTGAAAGAGC ATTCTGGTCT CCCTACGATG
ACCGTAGGCC TTATTACTGA CCCACATCAA GCAGAAGCTA TTTTAGAAGC TGGCGATGCT
GATTTGATTG CCTTAGCAAG AGCCTTTTTG TTTAAGCCGC GCTGGGGCTG GGAGGCAGCA
GCTGCATTAG GTGGAACAGT AACTGGTAAT GAGCGTTACT GGCGTTGTTT ACCTCGAGAA
GCGCAAACAG TATTTGGACC TGTGAAGGTT GGTCAACGTT AA
 
Protein sequence
MSLLFSPYTL NSPRGPLELP NRIVIAPMCQ YSATNGEATD WHLMHWGNLL NGGAALMIIE 
ATGVTPEARI TPACLGLWDD RTEAALKDKL TRARALAPAT PVFIQLAHAG RKASSATPWD
GGQLLPADKG GWETMAPSAI PQLEGERLPH ELSKSELKEL VDAFVIAAKR ADRIGLDGIE
LHGAHGYLLH QFLSPIANQR NDEYGGSFEN RIRFPLELFA AVRAAYQGVL GIRISASDWV
EGGWTPQETA EFAKQLKPLG CDFVHISSGG VSPNQKIALG PNYQVPFAKM VKEHSGLPTM
TVGLITDPHQ AEAILEAGDA DLIALARAFL FKPRWGWEAA AALGGTVTGN ERYWRCLPRE
AQTVFGPVKV GQR