Gene Pnuc_1020 details

Gene Information

• Locus tag: Pnuc_1020
• Symbol: prpE
• ID: 5053744
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1
• Kingdom: Bacteria
• Replicon accession: NC_009379
• Strand: -
• Start bp: 1020276
• End bp: 1022159
• Gene Length: 1884 bp
• Protein Length: 627 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640471187
• Product: propionyl-CoA synthetase
• Protein accession: YP_001155800
• Protein GI: 145589203
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
• TIGRFAM ID: [TIGR02188] acetate--CoA ligase; [TIGR02316] propionate--CoA ligase

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCTATA AAGCAACTCA CGAACGTTCA ATTAAAGACC CGGATGGATT CTGGGGTGAA 
CAGGCAAAAT TGATTCATTG GGAAAAGCCT TTTGAGAAAG TTCTGAATTA CGATAGCCCG 
CCATTTGCTA AATGGTTTGA AGGTGGCCTC ACCAATCTTT GTTACAACGC AGTCGACCGC 
CATTACAAAG AGCGTCCAGA TCAAATTGCC TTAGTTGCCG TATCTACTGA GACTAATCAA 
GAAAAAGCTT ATACATTCAA AGAGCTCTAC GAAGAAGTCA ATCGTATGGC TGCTATTTAC 
AAAGCAAATG GCATCCAAAA AGGCGATCGC GTACTGATAT ACATGCCAAT GATTGCTGAA 
GCTTGCTTTG CCATGCTTGC TTGTGCCCGC ATTGGTGCTA TTCATTCAGT GGTGTTTGGT 
GGGTTTGCAT CACATAGCCT TGCATCACGC ATTGATGATG CCAAGCCAAA AATGATCGTT 
ACAGCTGAAG CTGGAGCGCG TGGCGGTAAA GCAGTTCCTT ATAAGCCCCT GCTCGATGAA 
GCGATTACCC TGGCTGAATA CAAACCAGAA AAAGTATTAA TTGTGAATCG TGGCCTCACT 
GAATTTACAG CAGTTGCCGG TCGTGATTTG GATTACGCTA CAGAGCGCCA AAAACATCTC 
AACGACATTG TTCCGGTTGA GTGGGTGGAC GCGACACATC CTTCTTATAT TTTGTATACC 
TCTGGCACTA CTGGTAAGCC AAAGGGTGTT CAACGTGATA CTGGCGGATA CGCAGTAGCG 
CTCATGTCTA CGATGAACCA CATTTTCTGT GGCAAGCCTG GTGAAACCAT GTTTACTACT 
TCGGATATTG GCTGGGTAGT TGGACACAGC TACATTATTT ACGGTCCTCT GCTCAATGGT 
ATGGCCACCA TCATGTATGA GGGAACACCG CTACGTCCTG ATGCCGGTAT TTGGTGGGAG 
CTCGTTGCTA AATACAATGT TTCAGTTATG TTCTCAGCGC CAACTGCCGT ACGTGTATTG 
AAAAAGCAAG ATCCTGCTTT CTTGACTAAA CATGACCTTT CATCACTGCG CGCATTGTTT 
TTAGCAGGCG AGCCTTTGGA TGAACCTACT GCGAGTTGGA TTCATGATGC GATTAAGAAG 
CCAATCGTGG ACAATTATTG GCAGACAGAA ACAGGTTGGC CTATGTTAGC CATTCAGCGC 
GGCGTTGAGG TAATGCCCCA TAAGTTTGGA TCACCTGGTG TCCCCTCATT TGGTTACAAC 
ATGAAATTGC TTGATGATGC AACTTCTGCT GAGTTGGGTC CCGATCAAAA AGGCGTGATT 
GCTATAGAAG GTCCTTTACC TCCGGGCTGC ATGCAAACGG TTTGGGGTGA TGACAAGCGT 
TTTATTAGCA CCTACTGGGA AACCATTCCA GGCAAATTGA TTTACTCCAC ATTTGACTGG 
GGGATTAAAG ATAAAGACGG TTACTTCTTC ATCTTAGGTC GTACTGATGA TGTAATTAAC 
GTGGCAGGTC ATCGTTTAGG AACGCGTGAG ATTGAGGAAA GCATTTCTAG TCACCCAAAT 
ATTTCTGAGG TTGCTGTGGT TGGTATTGAG GACAAACTCA AAGGCCAAGC TGCCATTGCT 
TTTGTTATTC CAAAGGATTC TGCAAAAACA GAAAACCTGG AGGCTGAGTG CATGAAAACA 
GTGGATTCTC AATTAGGCGC CATCGCCCGC CCGGGTCGCG TGTATGTTGT CAATGCATTG 
CCTAAGACCC GTTCTGGCAA GATTGTTCGT CGCGCGCTTC AGGCGGTTGC GGAAGGTCGT 
GACCCTGGCG ATATCAGCAC AATGGAAGAC CAAGCTGTTT TGAGCCAAAT TAAAACCATC 
ATTGAGCAAA GCGCAAAAGC ATAA 

 

Protein sequence

MSYKATHERS IKDPDGFWGE QAKLIHWEKP FEKVLNYDSP PFAKWFEGGL TNLCYNAVDR 
HYKERPDQIA LVAVSTETNQ EKAYTFKELY EEVNRMAAIY KANGIQKGDR VLIYMPMIAE 
ACFAMLACAR IGAIHSVVFG GFASHSLASR IDDAKPKMIV TAEAGARGGK AVPYKPLLDE 
AITLAEYKPE KVLIVNRGLT EFTAVAGRDL DYATERQKHL NDIVPVEWVD ATHPSYILYT 
SGTTGKPKGV QRDTGGYAVA LMSTMNHIFC GKPGETMFTT SDIGWVVGHS YIIYGPLLNG 
MATIMYEGTP LRPDAGIWWE LVAKYNVSVM FSAPTAVRVL KKQDPAFLTK HDLSSLRALF 
LAGEPLDEPT ASWIHDAIKK PIVDNYWQTE TGWPMLAIQR GVEVMPHKFG SPGVPSFGYN 
MKLLDDATSA ELGPDQKGVI AIEGPLPPGC MQTVWGDDKR FISTYWETIP GKLIYSTFDW 
GIKDKDGYFF ILGRTDDVIN VAGHRLGTRE IEESISSHPN ISEVAVVGIE DKLKGQAAIA 
FVIPKDSAKT ENLEAECMKT VDSQLGAIAR PGRVYVVNAL PKTRSGKIVR RALQAVAEGR 
DPGDISTMED QAVLSQIKTI IEQSAKA