Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0999 |
Symbol | |
ID | 5052915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 994428 |
End bp | 995723 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640471164 |
Product | ABC transporter periplasmic protein |
Protein accession | YP_001155779 |
Protein GI | 145589182 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTGA AAATAAGCAT TAGCGGTTTA TTACCAGAAG CTACTACCCC CACTGTTGCT GATGCGAATC CTACGCGTCG CAAACTTATC CAAAGTATTG GCTCTGCCAG CATTCTGTCC TTAATCGACC CAATGGTTAA AGCGGGTGCA TGGGCGGCAG GCTCAGATGC CCCTGAGAAA ACGGATGTAA AGGTCAGTTT CATTGCCCTT ACAGACTGCT CATCGGTTGT CATGGCTAAC CATCTTGGTC TAGATAAGAA GTACGGCGTT AAGATCATCC CCACTAAAGA AGCGTCATGG GCTGCAATCC GTGACAAGCT TGTAAATGGC GAGAATGATA TGTCTCACAT CCTCTATGGT TTAGTTTATG GATTGCAGAT GGGTATTGGT GGCCAACAAA AAGATATGTC AGTTCTGATG TCTCTAAATA ATAATGGTCA GGCAATAACC TTATCAAAAG CGCTTTATCA AAAAGGTGTA AGTGATGGCG CCAGTCTTAA AGCGCTCATG GATAAAGAAA AGCGTGACTA CACTTTTGCG CAAACTTTCC CAACTGGTAC ACACGCTATG TGGCTTTACT ACTGGTTAGC GAACTATGGC ATTAATCCAT TTAAAGACGC AAAAATTATC ACCGTTCCGC CCCCACAAAT GGTCGCGAAT ATGCGTAGCG GAAATATGGA TGGCTATTGC GTAGGTGAAC CCTGGAATGC CCGCGCAATC ATTGACGGCA TTGGCTTTAC AGCCATTACT ACACAAGCAA TCTGGCAAGA TCATCCAGAA AAGGCTTTAG GAACAACCTC CGACTTTGCC AAGAAGTATC CCAATACTTG TCGCGCAGTT ACGGCAGCAA TATTAGAGGC TGGAAAATAT ATTGATGCAT CGACTTCGAA TAAGCATGCA ACTGCGGAAG TTGTAGCTGC ACCTTCATTT GTCAATACTG ATGTTAGTGT GATTCAAGAC CGCATGATGG GTCGCTATAA CAACGGTATC GGCAAAACTT GGGATGATCC CCATGCGATG AAATTCTATA ACGATGGTAT GGCTAATTAC CCCTACCTAT CTGATGGCAT GTGGTTTATG ACTCAGCACA AGCGCTGGGG TTTACTCAAA GAGCACCCAG ATTACTTGGC TGTAGCAAAA AAAGTAAACA ACATTGCGCT TTACAAAGAG GCTGCTACTG CTTCAAAGAC ACCACTACCA AAAAGCGATA TGCGCTCCAG CAAATTATTT GATGGTGTTG TGTGGAATGG CTCCAACCCT GCTGCTTATG CAGATAGCTT CAAGATCAAA GCATGA
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Protein sequence | MKVKISISGL LPEATTPTVA DANPTRRKLI QSIGSASILS LIDPMVKAGA WAAGSDAPEK TDVKVSFIAL TDCSSVVMAN HLGLDKKYGV KIIPTKEASW AAIRDKLVNG ENDMSHILYG LVYGLQMGIG GQQKDMSVLM SLNNNGQAIT LSKALYQKGV SDGASLKALM DKEKRDYTFA QTFPTGTHAM WLYYWLANYG INPFKDAKII TVPPPQMVAN MRSGNMDGYC VGEPWNARAI IDGIGFTAIT TQAIWQDHPE KALGTTSDFA KKYPNTCRAV TAAILEAGKY IDASTSNKHA TAEVVAAPSF VNTDVSVIQD RMMGRYNNGI GKTWDDPHAM KFYNDGMANY PYLSDGMWFM TQHKRWGLLK EHPDYLAVAK KVNNIALYKE AATASKTPLP KSDMRSSKLF DGVVWNGSNP AAYADSFKIK A
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