Gene Pnuc_0999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0999 
Symbol 
ID5052915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp994428 
End bp995723 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content45% 
IMG OID640471164 
ProductABC transporter periplasmic protein 
Protein accessionYP_001155779 
Protein GI145589182 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTGA AAATAAGCAT TAGCGGTTTA TTACCAGAAG CTACTACCCC CACTGTTGCT 
GATGCGAATC CTACGCGTCG CAAACTTATC CAAAGTATTG GCTCTGCCAG CATTCTGTCC
TTAATCGACC CAATGGTTAA AGCGGGTGCA TGGGCGGCAG GCTCAGATGC CCCTGAGAAA
ACGGATGTAA AGGTCAGTTT CATTGCCCTT ACAGACTGCT CATCGGTTGT CATGGCTAAC
CATCTTGGTC TAGATAAGAA GTACGGCGTT AAGATCATCC CCACTAAAGA AGCGTCATGG
GCTGCAATCC GTGACAAGCT TGTAAATGGC GAGAATGATA TGTCTCACAT CCTCTATGGT
TTAGTTTATG GATTGCAGAT GGGTATTGGT GGCCAACAAA AAGATATGTC AGTTCTGATG
TCTCTAAATA ATAATGGTCA GGCAATAACC TTATCAAAAG CGCTTTATCA AAAAGGTGTA
AGTGATGGCG CCAGTCTTAA AGCGCTCATG GATAAAGAAA AGCGTGACTA CACTTTTGCG
CAAACTTTCC CAACTGGTAC ACACGCTATG TGGCTTTACT ACTGGTTAGC GAACTATGGC
ATTAATCCAT TTAAAGACGC AAAAATTATC ACCGTTCCGC CCCCACAAAT GGTCGCGAAT
ATGCGTAGCG GAAATATGGA TGGCTATTGC GTAGGTGAAC CCTGGAATGC CCGCGCAATC
ATTGACGGCA TTGGCTTTAC AGCCATTACT ACACAAGCAA TCTGGCAAGA TCATCCAGAA
AAGGCTTTAG GAACAACCTC CGACTTTGCC AAGAAGTATC CCAATACTTG TCGCGCAGTT
ACGGCAGCAA TATTAGAGGC TGGAAAATAT ATTGATGCAT CGACTTCGAA TAAGCATGCA
ACTGCGGAAG TTGTAGCTGC ACCTTCATTT GTCAATACTG ATGTTAGTGT GATTCAAGAC
CGCATGATGG GTCGCTATAA CAACGGTATC GGCAAAACTT GGGATGATCC CCATGCGATG
AAATTCTATA ACGATGGTAT GGCTAATTAC CCCTACCTAT CTGATGGCAT GTGGTTTATG
ACTCAGCACA AGCGCTGGGG TTTACTCAAA GAGCACCCAG ATTACTTGGC TGTAGCAAAA
AAAGTAAACA ACATTGCGCT TTACAAAGAG GCTGCTACTG CTTCAAAGAC ACCACTACCA
AAAAGCGATA TGCGCTCCAG CAAATTATTT GATGGTGTTG TGTGGAATGG CTCCAACCCT
GCTGCTTATG CAGATAGCTT CAAGATCAAA GCATGA
 
Protein sequence
MKVKISISGL LPEATTPTVA DANPTRRKLI QSIGSASILS LIDPMVKAGA WAAGSDAPEK 
TDVKVSFIAL TDCSSVVMAN HLGLDKKYGV KIIPTKEASW AAIRDKLVNG ENDMSHILYG
LVYGLQMGIG GQQKDMSVLM SLNNNGQAIT LSKALYQKGV SDGASLKALM DKEKRDYTFA
QTFPTGTHAM WLYYWLANYG INPFKDAKII TVPPPQMVAN MRSGNMDGYC VGEPWNARAI
IDGIGFTAIT TQAIWQDHPE KALGTTSDFA KKYPNTCRAV TAAILEAGKY IDASTSNKHA
TAEVVAAPSF VNTDVSVIQD RMMGRYNNGI GKTWDDPHAM KFYNDGMANY PYLSDGMWFM
TQHKRWGLLK EHPDYLAVAK KVNNIALYKE AATASKTPLP KSDMRSSKLF DGVVWNGSNP
AAYADSFKIK A