| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0964 |
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| Symbol | |
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| ID | 5052891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 963971 |
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| End bp | 964762 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640471129 |
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| Product | TatD family hydrolase |
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| Protein accession | YP_001155744 |
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| Protein GI | 145589147 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.913879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTATAG ACTCCCACTG CCACCTCGAT TTCCCTGAAT TCCAAGCTCG TTTGCCGGAA
GTATTGGCTA ATATGGAAAA GGCACAGGTT AGCCATGGCT TATGTGTCTC AGTAGACATT
CCTGACTTTC CAAAAGTGTT GCAACTAGCG CAAGATCATC CCCATTTATA TGCATCTGTA
GGCGTTCATC CAGATTATGA AGATACGCCT GAACCCAGCT TTGAATTCTT GGTGGATACA
GCAAAAGCTA ACCCTAAAAT CATTGCTATA GGTGAAACTG GCTTAGATTA CTTCCGAATG
GGCGATCGAA GCTATGACTC TATGGAATGG CAACGAGATC GTTTCAGGAC CCATATACGC
GCTGCCATTG CCGCCAAAAA GCCTCTCATC ATTCATACAA GATCCGCATC AGAGGACACA
ATCCGAATTT TGAAGGAGGA GGGCGCTCAA TCCATTGGCG GCGTGATGCA TTGCTTTACA
GAAAGCCTGG ATGTGGCCAA AAAAGCAATG GATTTGGGGT TTTACATCTC TTTTTCTGGA
ATAGTGACTT TTAAAAGCGC TAAAGACCTC CAAGAAACTT GCAAACAGGT TCCTTTGGAA
AGAATGCTCA TTGAGACAGA TTCACCTTAT TTAGCCCCAA TTCCATACCG CGGCAAGACA
AATGAACCAG CCTATGTGGC TAAAGTAGGC GAATTTATAG CCGAATTAAA GGGCGTTTCA
TTGGAAGCCC TTGGAAAGCA AACATCAGAG AATTTTTTTG ATTGTTTTCA GATAGATAGA
ATTGATTCAT GA
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| Protein sequence | MFIDSHCHLD FPEFQARLPE VLANMEKAQV SHGLCVSVDI PDFPKVLQLA QDHPHLYASV
GVHPDYEDTP EPSFEFLVDT AKANPKIIAI GETGLDYFRM GDRSYDSMEW QRDRFRTHIR
AAIAAKKPLI IHTRSASEDT IRILKEEGAQ SIGGVMHCFT ESLDVAKKAM DLGFYISFSG
IVTFKSAKDL QETCKQVPLE RMLIETDSPY LAPIPYRGKT NEPAYVAKVG EFIAELKGVS
LEALGKQTSE NFFDCFQIDR IDS
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