| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0939 |
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| Symbol | |
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| ID | 5052648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 938624 |
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| End bp | 939298 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640471101 |
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| Product | ABC transporter related |
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| Protein accession | YP_001155719 |
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| Protein GI | 145589122 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.2553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATTC CAGGCAAAGT TCTCAGTGCC AACCATCTTG GCAAAAGTGT TTCATCTAGT
GATGGCGCTC TTAGCATTTT GCATGACATT TGCTTTGATA TTGAAGCCGG TGAAAGCGTG
GCCATTACTG GCACCTCAGG ATCCGGAAAA AGCACCTTGT TAAGTATTTT GGCTGGGTTA
GATGTGCCAA GCACTGGAAA TGTCACTTTG ATGGGTCAGG ACTTAAATTC GCTAGACGAA
GATGGCAGAG CTATCTTGCG GGGTGCTCAC GTTGGGTTTG TTTTCCAAAC CTTTCAGCTG
TTACCCCATT TGACGGCCTT AGAGAACGTC ATTTTGCCAG CGGAGTTAAA TGGGCTTAAA
AATGCTCAGG ATCAAGCCAA ATCTTGGCTA ACTCAGGTTG GTCTTCAGGA TCGCTTCAAC
CACTTTCCAG GCACTCTTTC AGGAGGTGAG CAGCAGCGGG TAGCCCTGGC TAGGGCGTTT
ATTAATAAAC CTGACATCCT TTTCGCAGAT GAGCCCACAG GCAGCCTTGA TGAGACTAGT
GGGGATAGGG TGATTGAGCT TCTTTTTGGC CTCAATAAGG CCAATAAATC GACCCTGATT
TTAGTAACCC ATGATTCAGC CTTGGCTGGG CGGTGTCAGC GTCAATTACA CCTTCAGGGT
GGGCGATTGT TATAG
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| Protein sequence | MSIPGKVLSA NHLGKSVSSS DGALSILHDI CFDIEAGESV AITGTSGSGK STLLSILAGL
DVPSTGNVTL MGQDLNSLDE DGRAILRGAH VGFVFQTFQL LPHLTALENV ILPAELNGLK
NAQDQAKSWL TQVGLQDRFN HFPGTLSGGE QQRVALARAF INKPDILFAD EPTGSLDETS
GDRVIELLFG LNKANKSTLI LVTHDSALAG RCQRQLHLQG GRLL
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