Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0936 |
Symbol | |
ID | 5053764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 933757 |
End bp | 936189 |
Gene Length | 2433 bp |
Protein Length | 810 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640471097 |
Product | ATP-dependent protease La |
Protein accession | YP_001155716 |
Protein GI | 145589119 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
TIGRFAM ID | [TIGR00763] ATP-dependent protease La [TIGR00764] lon-related putative ATP-dependent protease |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGGCC ACTTATTACT ACCCTCTGAG CCTATTCAAC TACCTTTGCT CCCTTTAAGG GATGTAGTTG TCTTCCCTCA TATGGTGATC CCGTTGTTTG TGGGACGCCC CAAATCCATC AAAGCGCTTG AAGCAGCTAT GGAAACGGGT AAAAACGTTC TTTTGGTTGC CCAAAAAACA GCCGCAAAGG ATGAGCCCGG CATAGAGGAT CTCTATGAAG TTGGTTGTAT TGCCAATATT CTTCAGATGC TCAAACTTCC AGATGGCACT GTTAAGGTGC TAGTGGAAGG AGTTCAGCGT GCTGAGGTGA GCCAAATTGA AGATAGCTTA GGTTATTTCA ATTGCGAAGC GACGCCTACA GCGATCAATG CTATTGATGC ACATGAAACC GAGGCGCTGC GTCGCGCCAT CATGGCTCAA TTTGATCAAT ACGTAAAACT GAACAAAAAA GTTCCGCAAG AAATATTGTC GTCGCTTGGC GGTATTGACG ACCCTAGTCG TTTGGCGGAT ACCATTTGCG CGCACTTGCC TGTCAAGCTA GAGCAGAAAC AGCGCTTGCT CGAAATGACG GATGTCGTTC AACGTCTTGA AAGTCTATTG GCCGACCTTG AAAGTGAAAT CGATATTCTT CAGGTTGAGA AGCGTATTCG TGGTCGCGTA AAGCGCCAGA TGGAAAAGAG TCAACGCGAG TATTACTTAA ATGAGCAAGT GAAGGCCATC CAGAAAGAGC TGGGTGAGGG CGAAGAGGGT GCGGATCTCG AGGAGCTGGA GAAACGAATT AAAGCTGCAC GTATGCCTAA AGAGGCTTTG AAAAAAGCCG AGTCTGAGCT TAAGAAACTC AAATTGATGT CGCCAATGTC AGCGGAAGCC ACTGTCATTC GTAATTTTAT TGATACTTTG GTTAATCTTC CTTGGAAGAA AAAAACCAAG ATTAATAACG ACCTCACCAA TGCTGAAAAA GTTTTGGATG AAGATCACTA TGGTTTAGAT AAGGTTAAAG AACGCATTCT GGAGTACCTC GCAGTCCAGC AGCGTGTTGA CCGCGTGAAA GCACCTATCC TTTGTTTAGT TGGCCCTCCT GGAGTTGGTA AAACTTCCTT AGGCCAATCT ATTGCACGTG CAACGAATAG AAAGTTTGTG CGTATGGCGC TGGGCGGAGT GCGTGATGAA TCTGAAATTC GTGGTCATCG CCGAACTTAT ATTGGCTCTA TGCCTGGCAA AATTTTATCT AGCCTTACAA AAGTAGGGGT TCGCAACCCT TTATTCTTAT TAGATGAGGT GGACAAGATG GGTATGGATT TCCGTGGAGA TCCTGCCAGT GCTTTGTTAG AAGTGTTAGA TCCTGAGCAA AACCATACTT TCCAAGATCA TTATGTGGAA GTGGATTTTG ATTTATCGGA CGTCATGTTC GTGGCAACGT CTAACTCTTT AAATATTCCA GGCCCTTTAT TGGACCGTCT TGAAATTATT CGTCTTGCTG GTTACACCGA AGATGAAAAG ACTAGTATTG CTGTTAACTA TTTAATTCCA AAGCAAATTA AAAATAATGG TCTGAAAAAA GATGAGCTAA AGATTGAAGA TAGCGCTGTG CGTAGCATGA TTCGTTACTA CACCCGAGAA GCTGGCGTAC GTTCTTTGGA AAGAGAAATC AGCAAGATTT GCCGCAAAGT AGTGAAGTTG TTGCTCTTGA AAAAAGAGGC CGCTCCTATT GTGGTTAATG CTGACAATCT TGAGAAGTTT CTCTCTGTTC GCATGTATGA CTTCGGTTTG GCTGGCAAAG AAAACCAAGT TGGCCAGGTA ACTGGTCTAG CATGGACAGA AGTAGGTGGT GATCTTCTGA CTATTGAAGC CGCGGTGATG CCTGGAAAAG GGGTTATTAC TCGTACTGGT TCAATCGGCG ACGTAATGAA AGAATCAGTT GAGGCTGCAC GTACAGTGGT TCGCTCTAGA TCAAAACGCC TTGGCATTAC TGATGAAGCT TTTGAGAAGA AAGATATTCA TATTCACTTC CCGGATGGCG CAACACCTAA AGATGGGCCT TCAGCTGGTA TAGCAATTAC CACTGCTTTG GTATCTGTAT TCACAGGCAT TCCAATTCGT TCTGATGTTG CAATGACTGG TGAGATAACA TTGCGTGGAG AAGTATTGCC CATTGGCGGC TTAAAGGAAA AGCTCTTAGC TGCCCATCGT GGTGGGATTA AGTTGGCTTT AATTCCGGAA GAAAATGTCA AAGATTTAAT TGATATTCCT GATAACGTCA AAAATGCAAT TGAGATTGTT CCTGTTCGCT GGATTGATAA AGTCCTTGAG CTAGCCTTAG AACGCATGCC AGAAGCTTTG CCTGAGCCGA CTCCTGAGGA GTTAGCCAAG AAAGCTGCTG AGGCCAGCAA AGCCAGTGGA AACGTTTCTT CTGGAGATGT TCTTAAGCAT TAA
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Protein sequence | MPGHLLLPSE PIQLPLLPLR DVVVFPHMVI PLFVGRPKSI KALEAAMETG KNVLLVAQKT AAKDEPGIED LYEVGCIANI LQMLKLPDGT VKVLVEGVQR AEVSQIEDSL GYFNCEATPT AINAIDAHET EALRRAIMAQ FDQYVKLNKK VPQEILSSLG GIDDPSRLAD TICAHLPVKL EQKQRLLEMT DVVQRLESLL ADLESEIDIL QVEKRIRGRV KRQMEKSQRE YYLNEQVKAI QKELGEGEEG ADLEELEKRI KAARMPKEAL KKAESELKKL KLMSPMSAEA TVIRNFIDTL VNLPWKKKTK INNDLTNAEK VLDEDHYGLD KVKERILEYL AVQQRVDRVK APILCLVGPP GVGKTSLGQS IARATNRKFV RMALGGVRDE SEIRGHRRTY IGSMPGKILS SLTKVGVRNP LFLLDEVDKM GMDFRGDPAS ALLEVLDPEQ NHTFQDHYVE VDFDLSDVMF VATSNSLNIP GPLLDRLEII RLAGYTEDEK TSIAVNYLIP KQIKNNGLKK DELKIEDSAV RSMIRYYTRE AGVRSLEREI SKICRKVVKL LLLKKEAAPI VVNADNLEKF LSVRMYDFGL AGKENQVGQV TGLAWTEVGG DLLTIEAAVM PGKGVITRTG SIGDVMKESV EAARTVVRSR SKRLGITDEA FEKKDIHIHF PDGATPKDGP SAGIAITTAL VSVFTGIPIR SDVAMTGEIT LRGEVLPIGG LKEKLLAAHR GGIKLALIPE ENVKDLIDIP DNVKNAIEIV PVRWIDKVLE LALERMPEAL PEPTPEELAK KAAEASKASG NVSSGDVLKH
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