Gene Pnuc_0909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0909 
Symbol 
ID5051923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp902488 
End bp903126 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content44% 
IMG OID640471069 
ProductGntR family transcriptional regulator 
Protein accessionYP_001155689 
Protein GI145589092 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.730812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACAA AACTGAATAA TAGACCCTTG TACGAAGACG TTGCTGACCG CCTGCGTGAG 
CAAATATTTA GTAAAGAGTT GGCTCCTGGA AGCTGGCTAG ATGAACAAGG CTTGGCTGAG 
CAATTTGGAA TTAGTCGAAC TCCTATGCGG GAAGCCATTA AGGTATTGGC TTCTGAAGGC 
CTAGTGACGA TCAAAATGCG TCGAGGCTCT TATGTCACTG AAGTTGCCAG AAAGGATTTA 
GAGCAAATCT TTACCATTCT TTCCCTATTA GAAGGTGAAG CAGCAAAGAT TACCGCCAGC 
AAAGCCACAG AAGCTGAGCT TAACTTGCTA GATCACTTAC ACCACCGACT TGAGAAGGCA 
GCTGCTGATC GAGATATAGA GCAATTTTTT GAGGTCAATG GCAAATTTCA TGAGCTCATT 
CAGGAGATCG CAGGAAATCG CTGGATGAAT GGCGTGATAA ATGACCTACG AAAAGTTCTT 
AAATTACATC GTCGAGATTC TCTGACGAGC ACGGGGCGTC TACAAAATTC ACTGATTGAG 
CATCGAGAAA TCCTCAATGC GATACTAAAG CGAGATCAAG TCGCAGCTGA ATTTGCGATG 
CGTAAACATT TGGCACGCGG GCTCGAAGCG GTTAAATAA
 
Protein sequence
MNTKLNNRPL YEDVADRLRE QIFSKELAPG SWLDEQGLAE QFGISRTPMR EAIKVLASEG 
LVTIKMRRGS YVTEVARKDL EQIFTILSLL EGEAAKITAS KATEAELNLL DHLHHRLEKA 
AADRDIEQFF EVNGKFHELI QEIAGNRWMN GVINDLRKVL KLHRRDSLTS TGRLQNSLIE 
HREILNAILK RDQVAAEFAM RKHLARGLEA VK