| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0887 |
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| Symbol | |
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| ID | 5053905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 879642 |
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| End bp | 880946 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640471045 |
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| Product | peptidase U32 |
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| Protein accession | YP_001155667 |
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| Protein GI | 145589070 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0117216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TCCCTGAACT CCTAGCCCCT GCCGGCAGCC TCCAAATGTT ACGCACCGCT
TTTGATTTTG GTGCCGATGC AATTTATGCA GGTCAACCGC GATATTCGCT ACGCGTACGC
AACAATGACT TTGGCAAGAT TGAGGTTCTT AAACAGGGAA TCGATACCGC CCATGACTTA
GGTAAAAAGT TTTATCTAGT ATCTAACTTA TTGCCGCATG GTGGTAAAAC GCGTACCTAT
ATTAAGGATA TGGACCCAGT CATTGCATTG AAACCTGATG CAATCATCAT GTCAGATCCT
GGCCTCATCA TGATGGCAAG AGAAGCGTGG CCTGATATGC CTATTCATTT ATCCGTTCAA
GCCAATACAG TCAATGGAGC ATCTGCAAAG TTCTGGCGTT CTGTTGGTAT AAGCCGCGTT
ATTTTGTCTC GTGAACTTTC TTTTGATGAA ATCGAAGAAG TACGTCAAGA CTGTCCAGAA
ATGGAACTTG AAGTTTTTGT ACACGGTGCG CTGTGTATTG CTTACTCTGG TCGCTGCTTA
CTTTCCGGCT ATATGTCTCA CCGCGACTCT AATCAAGGCG CATGTACTAA TGCTTGCCGC
TGGGACTACA AAGTAAAGCC AGGTCAACAA AATCAAAGTG GAGATGTAGT GTTACTACAA
GAAGCTAAAA GGCCTGATGA TTTGATGCCG ATGGAAGAGG ATGAGCATGG CACCTACATC
ATGAACTCTA AAGATTTACG CGCTATTGAA CACATCGAGA AACTGACTGC GATGGGAGTA
GATTCTTTCA AAATTGAAGG TCGTACAAAA TCACCCTATT ATGTTGCTCG CACCGCTCAA
GCCTACCGTG CTGCTATTGA TGATGCTGTT GCTGGGCGAC CATTTAATAC CGCATTACTA
GGTAATTTAG AGGGATTAGC CAATCGTGGT TATACCGACG GCTTCTATGA GCGTCATCAC
GATAAAGAAT ATCAACTCTA TATGCGTGGT TACTCTCTCT CGGGTAGAAG TCTATATGTT
GGAGAAACTT TAGAGGTTGA CGAAGTAAAT GGTCGCGTCA AAGTGGATGT CAAGAATCGT
TTTTCAGTAG GTGATAAGCT AGAAATTCTT GATCCTAAAG GCAATCAAGA TCTAGTACTC
GATGCCATGT GGAATATGAG TGGCGAACCC ATTACTGTTG CACCAGGATC AGGTCACTTT
GTTTGGATTC CGTTAAAAAT TAAAGGTCAG AAAGCCTACA TTGCACGCTA CACCAATGAG
CCTGCGCCTG TTGAAACTGA AAGCGCCTGC GCAACTTGCG GTTGA
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| Protein sequence | MKKIPELLAP AGSLQMLRTA FDFGADAIYA GQPRYSLRVR NNDFGKIEVL KQGIDTAHDL
GKKFYLVSNL LPHGGKTRTY IKDMDPVIAL KPDAIIMSDP GLIMMAREAW PDMPIHLSVQ
ANTVNGASAK FWRSVGISRV ILSRELSFDE IEEVRQDCPE MELEVFVHGA LCIAYSGRCL
LSGYMSHRDS NQGACTNACR WDYKVKPGQQ NQSGDVVLLQ EAKRPDDLMP MEEDEHGTYI
MNSKDLRAIE HIEKLTAMGV DSFKIEGRTK SPYYVARTAQ AYRAAIDDAV AGRPFNTALL
GNLEGLANRG YTDGFYERHH DKEYQLYMRG YSLSGRSLYV GETLEVDEVN GRVKVDVKNR
FSVGDKLEIL DPKGNQDLVL DAMWNMSGEP ITVAPGSGHF VWIPLKIKGQ KAYIARYTNE
PAPVETESAC ATCG
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