Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0847 |
Symbol | |
ID | 5052586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 842343 |
End bp | 843266 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640471006 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_001155629 |
Protein GI | 145589032 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACAAATA AAGCTCATTC CCAAGGTAGT AAGAAGACTA TTCAAGGCAG CATGCCGGCT ATTGTGACGC CGATGTTCGA GGACGGTAGT TTGGATTACC CAGGCTTACG AGCTTTGTTA GATTGGCATG TCAGCGAAGG TAGTGATGGC ATTGTGATTG TTGGAACTAG TGGTGAGTCG CCTACAGTTT CAGTAGAAGA ACATTGCGAA TTAATTCGAG TAACAGTTGA ACAAATTGCT GGCCGCATTC CTGTTATTGC TGGTACCGGT GGTAACTCGA CCCAAGAAGC GATTGAGCTC ACTCACTTTG CTAAAAAGGT TGGGGCTGAT GCAAGTTTGC AGGTGGTGCC TTACTACAAT AAGCCAACAC AAGAGGGTAT GTATGCCCAC TTTAAAAAAA TAGCAGAGTC TGTTGACCTT CCAGTCATTT TATATAACGT ACCAGGGCGC ACCGTAGCTG ACATGGCTGG TGATACCGTA GTGCGACTAG CGGGTGTACC GGGCATCATT GGCATTAAAG ATGCGACCGG TAGCTTAGAG CGCGGCACCT TATTGATTAA TGACCTCAAG CGTGCAGGTC ACCATGAGTT CTCTGTTTTC TCCGGCGATG ATTTAACTGC GGCGATGTTG ATGCTAATGG GCGGTCATGG CAATATCTCT GTGACTGCAA ACGTGGCCCC GCGTTTAATG CATGAATTGT GTGTTGCTGC AATGTCAGAT GATGTGAAAA GAACACGTGA AATTCAGTAC CAACTAATCG CAGTACATAA AGCAATGTTC ATAGAGGCCA ATCCAATTCC TGTGAAATGG GCGCTTCATG AAATGGGTAA GATTACCGCC GGCATCCGTT TGCCGTTAAC CCCTTTAAGC AGCTCTTTAA GAGAGCCTCT GAAGGCAGCA TTAAAACAGG CAAACTTACT ATGA
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Protein sequence | MTNKAHSQGS KKTIQGSMPA IVTPMFEDGS LDYPGLRALL DWHVSEGSDG IVIVGTSGES PTVSVEEHCE LIRVTVEQIA GRIPVIAGTG GNSTQEAIEL THFAKKVGAD ASLQVVPYYN KPTQEGMYAH FKKIAESVDL PVILYNVPGR TVADMAGDTV VRLAGVPGII GIKDATGSLE RGTLLINDLK RAGHHEFSVF SGDDLTAAML MLMGGHGNIS VTANVAPRLM HELCVAAMSD DVKRTREIQY QLIAVHKAMF IEANPIPVKW ALHEMGKITA GIRLPLTPLS SSLREPLKAA LKQANLL
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