Gene Pnuc_0838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0838 
Symbol 
ID5053269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp831667 
End bp831951 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content45% 
IMG OID640470997 
Producthistone family protein nucleoid-structuring protein H-NS 
Protein accessionYP_001155620 
Protein GI145589023 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCTT ATAAAGAACT TCTAGCCCAA CGCGAGCAGT TAGATAAACA GATTAAAGAG 
GCTGTTGCAC GTGAAAAGGC GGATGGAATT GCTAAGGCAA AGCTGATTAT TGAGCAATAT
GACTTATCTG CTTCAGACCT TTTTAGCCGC AAAACAGGGG GTAAATCTGC TGGTGGCAAA
GTGGCACCTA AGTATCGCAA CCCTTCTACA GGCGAAACCT GGACAGGTCG CGGTAAAGCT
CCTAAATGGA TTGACGGTAG AGATCGCAGT AGTTTCCTGA TCTAA
 
Protein sequence
MSSYKELLAQ REQLDKQIKE AVAREKADGI AKAKLIIEQY DLSASDLFSR KTGGKSAGGK 
VAPKYRNPST GETWTGRGKA PKWIDGRDRS SFLI